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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103842679   probable splicing factor 3A subunit 1 
 bna-r.1   106368888   probable splicing factor 3A subunit 1 
 bna-r.1   106369075   probable splicing factor 3A subunit 1 

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Top 50 coexpressed genes to 103842679 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103842679 (bra-r.6 coexpression data)

CoexMap"103842679"


braLOC103842679 | Entrez gene ID : 103842679    
Species bra bna gma zma ghi sbi sly cit ath nta tae mtr osa hvu bdi vvi sot cre ppo
Paralog 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp03040 [list] [network] Spliceosome (434 genes)
GO BP
GO:0000381 [list] [network] regulation of alternative mRNA splicing, via spliceosome  (10 genes)  IEA  
GO:0045292 [list] [network] mRNA cis splicing, via spliceosome  (31 genes)  IEA  
GO CC
GO:0005686 [list] [network] U2 snRNP  (41 genes)  IEA  
GO:0071004 [list] [network] U2-type prespliceosome  (45 genes)  IEA  
GO:0071013 [list] [network] catalytic step 2 spliceosome  (104 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1857 genes)  IEA  
Protein XP_009117584.2 [sequence] [blastp]
XP_009117585.2 [sequence] [blastp]
XP_033135623.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 3,  nucl 1,  mito 1,  pero 1,  plas 1,  extr 1,  E.R. 1,  cysk 1,  chlo_mito 1,  cyto_mito 1,  cysk_plas 1,  E.R._plas 1  (predict for XP_009117584.2)
cyto 4,  nucl 1,  mito 1,  pero 1,  extr 1,  E.R. 1,  cysk 1,  chlo_mito 1,  cyto_mito 1,  nucl_plas 1,  mito_plas 1  (predict for XP_009117585.2)
cyto 3,  nucl 2,  cyto_pero 2,  pero 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_033135623.1)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for XP_009117584.2)
other 7,  chlo 4  (predict for XP_009117585.2)
other 7,  chlo 4  (predict for XP_033135623.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103842679
bna-r.1
for
106368888
bna-r.1
for
106369075


Ortholog ID: 26543
Species bra bna bna
Symbol LOC103842679 LOC106368888 LOC106369075
Function* probable splicing factor 3A subunit 1 probable splicing factor 3A subunit 1 probable splicing factor 3A subunit 1
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103842679 106368888 106369075
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