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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103842887   protein TOPLESS 
 ath-u.5   WSIP2   WUS-interacting protein 2 
 ath-u.5   TPR2   TOPLESS-related 2 
 ath-u.5   TPR3   TOPLESS-related 3 
 gma-u.5   100793575   topless-related protein 3 
 gma-u.5   100808421   topless-related protein 3 
 gma-u.5   100805156   topless-related protein 4 
 vvi-u.5   100248092   protein TOPLESS 
 vvi-u.5   100262752   topless-related protein 1 
 vvi-u.5   100261303   topless-related protein 3 
 ppo-u.5   7474683   topless-related protein 4 
 ppo-u.5   7481713   topless-related protein 3 
 ppo-u.5   7489125   topless-related protein 1 
 mtr-u.5   11415137   topless-related protein 2 
 mtr-u.5   11405937   topless-related protein 3 
 sly-u.5   101252765   protein TOPLESS 
 sly-u.5   101244499   topless-related protein 4-like 
 sly-u.5   101248801   topless-related protein 1-like 
 osa-u.5   4344728   protein TOPLESS-RELATED PROTEIN 2-like 
 osa-u.5   4327709   protein TPR1-like 
 osa-u.5   TPR3   protein TPR3-like 
 zma-u.5   100193888   uncharacterized LOC100193888 
 zma-u.5   103634695   protein TPR1 

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Top 50 coexpressed genes to 103842887 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103842887 (bra-r.6 coexpression data)

CoexMap"103842887"


braLOC103842887 | Entrez gene ID : 103842887    
Species bra ath gma vvi ppo mtr sly osa zma bdi hvu cit bna sbi ghi sot nta cre tae
Paralog 1 3 3 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (2595 genes)  IEA  
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_009117812.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 2,  cyto 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cysk_plas 1,  cyto_E.R. 1  (predict for XP_009117812.2)
Subcellular
localization
TargetP
scret 5,  other 4  (predict for XP_009117812.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103842887
ath-u.5
for
WSIP2
ath-u.5
for
TPR2
ath-u.5
for
TPR3
gma-u.5
for
100793575
gma-u.5
for
100808421
gma-u.5
for
100805156
vvi-u.5
for
100248092
vvi-u.5
for
100262752
vvi-u.5
for
100261303
ppo-u.5
for
7474683
ppo-u.5
for
7481713
ppo-u.5
for
7489125
mtr-u.5
for
11415137
mtr-u.5
for
11405937
sly-u.5
for
101252765
sly-u.5
for
101244499
sly-u.5
for
101248801
osa-u.5
for
4344728
osa-u.5
for
4327709
osa-u.5
for
TPR3
zma-u.5
for
100193888
zma-u.5
for
103634695


Ortholog ID: 377
Species bra bra bna bna ath ath ghi ghi cit cit gma gma vvi vvi ppo ppo mtr sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC103869731 LOC103842887 LOC106439427 LOC106349833 TPL WSIP2 LOC121204747 LOC107957517 LOC102608406 LOC102607647 LOC100800771 LOC100790282 LOC100248092 LOC100247343 LOC18094856 LOC7459881 LOC11420997 LOC101248801 LOC101244499 LOC102596120 LOC102581018 LOC107832581 LOC107818525 LOC4327709 LOC4344728 LOC103634695 LOC100193888 LOC123085314 LOC123159638 LOC123449126 LOC123410003 LOC110433802 LOC8054324 LOC100834097 LOC100832352
Function* topless-related protein 2 protein TOPLESS topless-related protein 4 protein TOPLESS Transducin family protein / WD-40 repeat family protein WUS-interacting protein 2 protein TOPLESS-RELATED PROTEIN 2 topless-related protein 1 topless-related protein 3 topless-related protein 4-like topless-related protein 3 topless-related protein 1 protein TOPLESS topless-related protein 4 protein TOPLESS topless-related protein 4 topless-related protein 1 topless-related protein 1-like topless-related protein 4-like topless-related protein 1-like protein TOPLESS-like topless-related protein 3-like topless-related protein 1 protein TPR1-like protein TOPLESS-RELATED PROTEIN 2-like protein TPR1 uncharacterized LOC100193888 protein TPR3 protein TPR1 protein TPR3 protein TOPLESS-RELATED PROTEIN 2 protein TPR1 protein TPR3 protein TPR1 protein TPR2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 3
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 4
ath03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi03082 ATP-dependent chromatin remodeling 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
ghi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma00190 Oxidative phosphorylation 2
gma04075 Plant hormone signal transduction 2
gma00260 Glycine, serine and threonine metabolism 2
gma00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00511 Other glycan degradation 2
nta00513 Various types of N-glycan biosynthesis 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta00531 Glycosaminoglycan degradation 2
nta00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 2
zma03250 Viral life cycle - HIV-1 2
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 4
tae00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04146 Peroxisome 2
hvu03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00650 Butanoate metabolism 2
sbi00561 Glycerolipid metabolism 2
sbi01200 Carbon metabolism 2
sbi04120 Ubiquitin mediated proteolysis 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 5
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 3
bdi04142 Lysosome 2
bdi05100 Bacterial invasion of epithelial cells 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103869731 103842887 106439427 106349833 838144 820831 121204747 107957517 102608406 102607647 100800771 100790282 100248092 100247343 18094856 7459881 11420997 101248801 101244499 102596120 102581018 107832581 107818525 4327709 4344728 103634695 100193888 123085314 123159638 123449126 123410003 110433802 8054324 100834097 100832352
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