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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6  103844669  U-box domain-containing protein 56 
 bra-r.6  103844670  U-box domain-containing protein 54 
 bra-r.6  103834705  U-box domain-containing protein 56 
 bna-r.1  125584346  U-box domain-containing protein 54-like 
 bna-r.1  111202347  U-box domain-containing protein 54-like 
 ath-u.5  PUB54  plant U-box 54 
 ath-u.5  AT1G01670  RING/U-box superfamily protein 
 cre-r.1  CHLRE_08g383550v5  uncharacterized protein 

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Top 50 coexpressed genes to 103844669 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103844669 (bra-r.6 coexpression data)

CoexMap"103844669"


braLOC103844669 | Entrez gene ID : 103844669
Species bra bna ath cre hvu sot bdi sly nta vvi osa tae ppo zma mtr sbi gma ghi cit
Paralog 3 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (533 genes)  IEA  
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (531 genes)  IEA  
Protein XP_009119717.1 [sequence] [blastp]
XP_009119718.1 [sequence] [blastp]
XP_033138011.1 [sequence] [blastp]
XP_033138012.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 2,  nucl 2  (predict for XP_009119717.1)
nucl 6,  cyto 2,  chlo 1,  cysk 1  (predict for XP_009119718.1)
chlo 6,  nucl 1,  cyto 1,  mito 1,  vacu 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_033138011.1)
nucl 6,  chlo 3,  cyto_nucl 3,  cysk_nucl 3,  nucl_plas 3  (predict for XP_033138012.1)
Subcellular
localization
TargetP
chlo 4,  other 3  (predict for XP_009119717.1)
other 9  (predict for XP_009119718.1)
scret 7,  other 6  (predict for XP_033138011.1)
mito 3,  other 3  (predict for XP_033138012.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bra-r.6
for
103844669


bra-r.6
for
103844670


bra-r.6
for
103834705


bna-r.1
for
125584346


bna-r.1
for
111202347


ath-u.5
for
PUB54


ath-u.5
for
AT1G01670


cre-r.1
for
CHLRE_08g383550v5



Ortholog ID: 12956
Species bra bra bna bna bna ath ath cre
Symbol LOC103844669 LOC103844670 LOC111202347 LOC106370859 LOC106370857 PUB54 AT1G01670 CHLRE_08g383550v5
Function* U-box domain-containing protein 56 U-box domain-containing protein 54 U-box domain-containing protein 54-like U-box domain-containing protein 56-like U-box domain-containing protein 54 plant U-box 54 RING/U-box superfamily protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103844669 103844670 111202347 106370859 106370857 839251 839365 5719821
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