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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103844748   putative pentatricopeptide repeat-containing protein At5g52630 
 bna-r.1   106421412   putative pentatricopeptide repeat-containing protein At5g52630 
 bna-r.1   106403117   putative pentatricopeptide repeat-containing protein At5g52630 
 ath-u.5   MEF1   mitochondrial RNAediting factor 1 
 ghi-r.1   107937421   putative pentatricopeptide repeat-containing protein At5g52630 
 cit-r.1   102630522   putative pentatricopeptide repeat-containing protein At5g52630 
 gma-u.5   100800235   putative pentatricopeptide repeat-containing protein At5g52630 
 vvi-u.5   100246870   putative pentatricopeptide repeat-containing protein At5g52630 
 ppo-u.5   7484008   putative pentatricopeptide repeat-containing protein At5g52630 
 mtr-u.5   11437918   putative pentatricopeptide repeat-containing protein At5g52630 
 sly-u.5   101247893   putative pentatricopeptide repeat-containing protein At5g52630 
 sot-r.1   102595773   putative pentatricopeptide repeat-containing protein At5g52630 
 nta-r.1   107811746   putative pentatricopeptide repeat-containing protein At5g52630 
 nta-r.1   107792537   putative pentatricopeptide repeat-containing protein At5g52630 
 zma-u.5   112163627   uncharacterized LOC112163627 
 tae-r.2   123078679   putative pentatricopeptide repeat-containing protein At5g52630 
 tae-r.2   123070234   putative pentatricopeptide repeat-containing protein At5g52630 
 hvu-r.1   123443986   putative pentatricopeptide repeat-containing protein At5g52630 
 bdi-r.1   106865933   putative pentatricopeptide repeat-containing protein At5g52630 

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Top 50 coexpressed genes to 103844748 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103844748 (bra-r.6 coexpression data)

CoexMap"103844748"


braLOC103844748 | Entrez gene ID : 103844748    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta zma tae hvu bdi cre osa sbi
Paralog 1 2 1 1 1 1 1 1 1 1 1 2 1 2 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (422 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (1500 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1857 genes)  IEA  
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_009119804.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 3,  cyto 1,  plas 1,  cysk 1,  cysk_plas 1,  cyto_plas 1  (predict for XP_009119804.1)
Subcellular
localization
TargetP
other 6,  scret 3  (predict for XP_009119804.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103844748
bna-r.1
for
106421412
bna-r.1
for
106403117
ath-u.5
for
MEF1
ghi-r.1
for
107937421
cit-r.1
for
102630522
gma-u.5
for
100800235
vvi-u.5
for
100246870
ppo-u.5
for
7484008
mtr-u.5
for
11437918
sly-u.5
for
101247893
sot-r.1
for
102595773
nta-r.1
for
107811746
nta-r.1
for
107792537
zma-u.5
for
112163627
tae-r.2
for
123078679
tae-r.2
for
123070234
hvu-r.1
for
123443986
bdi-r.1
for
106865933


Ortholog ID: 11759
Species bra bna bna ath ghi cit gma vvi ppo mtr sly sot nta nta zma tae tae hvu bdi
Symbol LOC103844748 LOC106421412 LOC106403117 MEF1 LOC107937421 LOC102630522 LOC100800235 LOC100246870 LOC7484008 LOC11437918 LOC101247893 LOC102595773 LOC107811746 LOC107792537 LOC112163627 LOC123078679 LOC123070234 LOC123443986 LOC106865933
Function* putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 mitochondrial RNAediting factor 1 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 uncharacterized LOC112163627 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00300 Lysine biosynthesis 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 3
tae04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 8
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103844748 106421412 106403117 835340 107937421 102630522 100800235 100246870 7484008 11437918 101247893 102595773 107811746 107792537 112163627 123078679 123070234 123443986 106865933
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