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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103845887   5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 
 ath-u.5   MS2   methionine synthase 2 
 ath-u.5   ATMS1   Cobalamin-independent synthase family protein 
 ath-u.5   MS3   methionine synthase 3 
 gma-u.5   100779947   5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 
 gma-u.5   100807833   5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 
 gma-u.5   100776541   5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 
 vvi-u.5   100248500   5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 
 vvi-u.5   100242762   5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2 
 ppo-u.5   7482366   5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 
 ppo-u.5   112323225   5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 
 ppo-u.5   18098013   5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 
 mtr-u.5   11439549   5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 
 mtr-u.5   11442193   5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 
 mtr-u.5   25495847   5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 
 sly-u.5   ER69   5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 
 sly-u.5   101250617   5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 
 osa-u.5   4352832   5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1-like 
 osa-u.5   4352833   5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2-like 
 zma-u.5   541714   5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 
 zma-u.5   541942   uncharacterized LOC541942 
 zma-u.5   100286153   uncharacterized LOC100286153 

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Top 50 coexpressed genes to 103845887 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103845887 (bra-r.6 coexpression data)

CoexMap"103845887"


braLOC103845887 | Entrez gene ID : 103845887    
Species bra ath gma vvi ppo mtr sly osa zma hvu bna cit ghi sbi bdi nta tae cre sot
Paralog 1 3 3 2 3 3 2 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp00270 [list] [network] Cysteine and methionine metabolism (193 genes)
brp00450 [list] [network] Selenocompound metabolism (27 genes)
brp01230 [list] [network] Biosynthesis of amino acids (370 genes)
GO BP
GO:0009086 [list] [network] methionine biosynthetic process  (30 genes)  IEA  
GO CC
GO MF
GO:0003871 [list] [network] 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity  (6 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1500 genes)  IEA  
Protein XP_009121037.2 [sequence] [blastp]
XP_018511143.2 [sequence] [blastp]
XP_033138087.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  mito 4,  chlo 1,  nucl 1  (predict for XP_009121037.2)
cyto 5,  mito 4,  chlo 1,  nucl 1  (predict for XP_018511143.2)
cyto 5,  mito 4,  chlo 1,  nucl 1  (predict for XP_033138087.1)
Subcellular
localization
TargetP
other 7,  mito 4  (predict for XP_009121037.2)
other 7,  mito 4  (predict for XP_018511143.2)
other 7,  mito 4  (predict for XP_033138087.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103845887
ath-u.5
for
MS2
ath-u.5
for
ATMS1
ath-u.5
for
MS3
gma-u.5
for
100779947
gma-u.5
for
100807833
gma-u.5
for
100776541
vvi-u.5
for
100248500
vvi-u.5
for
100242762
ppo-u.5
for
7482366
ppo-u.5
for
112323225
ppo-u.5
for
18098013
mtr-u.5
for
11439549
mtr-u.5
for
11442193
mtr-u.5
for
25495847
sly-u.5
for
ER69
sly-u.5
for
101250617
osa-u.5
for
4352832
osa-u.5
for
4352833
zma-u.5
for
541714
zma-u.5
for
541942
zma-u.5
for
100286153


Ortholog ID: 1344
Species bra bra bna bna ath ath ghi ghi cit cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC103859011 LOC103856476 LOC106447616 LOC106426141 MS2 ATMS1 LOC107893772 LOC107937302 LOC102616845 LOC102606650 LOC100811317 LOC547643 LOC100242762 LOC100248500 LOC7478605 LOC18098013 LOC11442193 LOC25495847 LOC101250617 ER69 LOC102588440 MS LOC107811094 LOC107768359 LOC4352832 LOC4352833 LOC541714 LOC100286153 LOC123087362 LOC123110172 LOC123397666 LOC123446921 LOC110431907 LOC110429673 LOC104583973 LOC100824461 CHLRE_03g180750v5
Function* 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 3, chloroplastic 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 methionine synthase 2 Cobalamin-independent synthase family protein 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1-like 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase methionine synthase 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase-like methionine synthase 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase-like 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1-like 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2-like 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 uncharacterized LOC100286153 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1-like 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00920 Sulfur metabolism 8
bra00230 Purine metabolism 6
bra01320 Sulfur cycle 6
bra00966 Glucosinolate biosynthesis 3
bra00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 8
bna00450 Selenocompound metabolism 8
bna01230 Biosynthesis of amino acids 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 8
bna00450 Selenocompound metabolism 8
bna01230 Biosynthesis of amino acids 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00670 One carbon pool by folate 6
ath00940 Phenylpropanoid biosynthesis 6
ath01230 Biosynthesis of amino acids 5
ath00270 Cysteine and methionine metabolism 5
ath01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00670 One carbon pool by folate 7
ath01230 Biosynthesis of amino acids 6
ath00270 Cysteine and methionine metabolism 5
ath01200 Carbon metabolism 4
ath01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 9
ghi00450 Selenocompound metabolism 9
ghi01230 Biosynthesis of amino acids 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 9
ghi00450 Selenocompound metabolism 9
ghi01230 Biosynthesis of amino acids 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03040 Spliceosome 2
cit04144 Endocytosis 2
cit03013 Nucleocytoplasmic transport 2
cit00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 11
cit00270 Cysteine and methionine metabolism 9
cit00670 One carbon pool by folate 7
cit01240 Biosynthesis of cofactors 6
cit00260 Glycine, serine and threonine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 5
gma00270 Cysteine and methionine metabolism 5
gma01230 Biosynthesis of amino acids 5
gma00053 Ascorbate and aldarate metabolism 3
gma00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00670 One carbon pool by folate 8
gma01230 Biosynthesis of amino acids 8
gma01200 Carbon metabolism 7
gma01240 Biosynthesis of cofactors 6
gma00270 Cysteine and methionine metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00270 Cysteine and methionine metabolism 4
vvi00670 One carbon pool by folate 4
vvi01230 Biosynthesis of amino acids 4
vvi04145 Phagosome 2
vvi00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00670 One carbon pool by folate 5
vvi00270 Cysteine and methionine metabolism 4
vvi01230 Biosynthesis of amino acids 4
vvi01200 Carbon metabolism 3
vvi04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 8
ppo00270 Cysteine and methionine metabolism 7
ppo01200 Carbon metabolism 6
ppo00450 Selenocompound metabolism 4
ppo00030 Pentose phosphate pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 12
ppo00270 Cysteine and methionine metabolism 11
ppo00670 One carbon pool by folate 8
ppo01240 Biosynthesis of cofactors 6
ppo01200 Carbon metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 3
mtr00240 Pyrimidine metabolism 2
mtr00760 Nicotinate and nicotinamide metabolism 2
mtr01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 10
mtr00270 Cysteine and methionine metabolism 8
mtr00670 One carbon pool by folate 8
mtr01200 Carbon metabolism 6
mtr01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 3
sly00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 7
sly01240 Biosynthesis of cofactors 6
sly00270 Cysteine and methionine metabolism 4
sly01200 Carbon metabolism 4
sly00670 One carbon pool by folate 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00230 Purine metabolism 3
sot01230 Biosynthesis of amino acids 3
sot00670 One carbon pool by folate 3
sot01240 Biosynthesis of cofactors 3
sot04981 Folate transport and metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00670 One carbon pool by folate 9
sot01230 Biosynthesis of amino acids 7
sot01240 Biosynthesis of cofactors 7
sot01200 Carbon metabolism 6
sot00270 Cysteine and methionine metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 15
nta01200 Carbon metabolism 11
nta00670 One carbon pool by folate 9
nta00270 Cysteine and methionine metabolism 8
nta00260 Glycine, serine and threonine metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 9
nta00270 Cysteine and methionine metabolism 8
nta00450 Selenocompound metabolism 6
nta01200 Carbon metabolism 5
nta01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 7
osa01230 Biosynthesis of amino acids 6
osa00270 Cysteine and methionine metabolism 4
osa00670 One carbon pool by folate 4
osa00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 6
osa00670 One carbon pool by folate 5
osa00270 Cysteine and methionine metabolism 4
osa00630 Glyoxylate and dicarboxylate metabolism 3
osa01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 9
zma00270 Cysteine and methionine metabolism 5
zma00670 One carbon pool by folate 5
zma01200 Carbon metabolism 4
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 9
zma00270 Cysteine and methionine metabolism 6
zma00670 One carbon pool by folate 6
zma01200 Carbon metabolism 4
zma01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 8
tae00670 One carbon pool by folate 7
tae00270 Cysteine and methionine metabolism 6
tae01200 Carbon metabolism 6
tae01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00670 One carbon pool by folate 15
tae00270 Cysteine and methionine metabolism 12
tae01230 Biosynthesis of amino acids 12
tae01240 Biosynthesis of cofactors 9
tae00999 Biosynthesis of various plant secondary metabolites 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00270 Cysteine and methionine metabolism 6
hvu01230 Biosynthesis of amino acids 6
hvu00670 One carbon pool by folate 6
hvu01240 Biosynthesis of cofactors 4
hvu01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 4
hvu00940 Phenylpropanoid biosynthesis 3
hvu00010 Glycolysis / Gluconeogenesis 2
hvu00350 Tyrosine metabolism 2
hvu00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00670 One carbon pool by folate 7
sbi00270 Cysteine and methionine metabolism 6
sbi01230 Biosynthesis of amino acids 6
sbi01240 Biosynthesis of cofactors 4
sbi00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00670 One carbon pool by folate 6
sbi00270 Cysteine and methionine metabolism 5
sbi01230 Biosynthesis of amino acids 5
sbi01240 Biosynthesis of cofactors 3
sbi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00270 Cysteine and methionine metabolism 5
bdi01230 Biosynthesis of amino acids 5
bdi00670 One carbon pool by folate 4
bdi00520 Amino sugar and nucleotide sugar metabolism 4
bdi01250 Biosynthesis of nucleotide sugars 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 9
bdi00270 Cysteine and methionine metabolism 6
bdi00670 One carbon pool by folate 5
bdi01200 Carbon metabolism 4
bdi00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 6
cre00270 Cysteine and methionine metabolism 6
cre00670 One carbon pool by folate 5
cre01200 Carbon metabolism 4
cre01240 Biosynthesis of cofactors 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103859011 103856476 106447616 106426141 821147 831660 107893772 107937302 102616845 102606650 100811317 547643 100242762 100248500 7478605 18098013 11442193 25495847 101250617 101264078 102588440 102577638 107811094 107768359 4352832 4352833 541714 100286153 123087362 123110172 123397666 123446921 110431907 110429673 104583973 100824461 5728446
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