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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103853261   cyclin-A2-4 
 bra-r.6   103842893   cyclin-A2-3 
 bra-r.6   103872352   cyclin-A2-3 
 bra-r.6   103858695   cyclin-A2-4 
 bna-r.1   106391323   cyclin-A2-2 
 bna-r.1   106370658   cyclin-A2-2 
 bna-r.1   106367069   cyclin-A2-3 
 ath-u.5   CYC3B   mitotic-like cyclin 3B from Arabidopsi 
 ath-u.5   CYCA2;3   CYCLIN A2;3 
 ghi-r.1   121230390   cyclin-A2-2 
 ghi-r.1   121203422   cyclin-A2-4 
 ghi-r.1   107913925   cyclin-A2-4 
 cit-r.1   102630346   cyclin-A2-1 
 cit-r.1   102630886   cyclin-A2-4 
 gma-u.5   100793657   cyclin-A2-4 
 gma-u.5   100805701   cyclin-A2-2 
 gma-u.5   100807750   cyclin-A2-2 
 vvi-u.5   100254892   cyclin-A2-3 
 vvi-u.5   100245617   cyclin-A2-2 
 ppo-u.5   7490979   cyclin-A2-4 
 mtr-u.5   11431336   cyclin-A2-2 
 mtr-u.5   11430005   cyclin-A2-4 
 mtr-u.5   11430006   cyclin-A2-4 
 sly-u.5   101261801   cyclin-A2-4 
 sly-u.5   CycA2   cyclin A2 
 sot-r.1   102604868   cyclin-A2-2-like 
 nta-r.1   107810034   cyclin-A2-2-like 
 nta-r.1   107786442   cyclin-A2-2-like 
 nta-r.1   107811824   cyclin-A2-2-like 
 osa-u.5   4352280   cyclin-A2-1-like 
 zma-u.5   100280697   cyclin-A2 
 zma-u.5   100285386   cyclin-A2 
 tae-r.2   123102772   cyclin-A2-1 
 tae-r.2   123063654   cyclin-A2-1 
 tae-r.2   123176985   cyclin-A2-1 
 hvu-r.1   123445663   cyclin-A2-1-like 
 sbi-r.1   8064979   cyclin-A2-1 
 bdi-r.1   100824825   cyclin-A2-1 

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Top 50 coexpressed genes to 103853261 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103853261 (bra-r.6 coexpression data)

CoexMap"103853261"


braLOC103853261 | Entrez gene ID : 103853261    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 2 3 2 3 2 1 3 2 1 3 1 2 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0044772 [list] [network] mitotic cell cycle phase transition  (64 genes)  IEA  
GO:0000079 [list] [network] regulation of cyclin-dependent protein serine/threonine kinase activity  (83 genes)  IEA  
GO CC
GO:0000307 [list] [network] cyclin-dependent protein kinase holoenzyme complex  (127 genes)  IEA  
GO:0005634 [list] [network] nucleus  (4801 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (7940 genes)  IEA  
GO MF
GO:0016538 [list] [network] cyclin-dependent protein serine/threonine kinase regulator activity  (82 genes)  IEA  
Protein XP_009128429.1 [sequence] [blastp]
XP_033141835.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_009128429.1)
chlo 10  (predict for XP_033141835.1)
Subcellular
localization
TargetP
chlo 3,  mito 3  (predict for XP_009128429.1)
chlo 3,  mito 3  (predict for XP_033141835.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103853261
bra-r.6
for
103842893
bra-r.6
for
103872352
bra-r.6
for
103858695
bna-r.1
for
106391323
bna-r.1
for
106370658
bna-r.1
for
106367069
ath-u.5
for
CYC3B
ath-u.5
for
CYCA2;3
ghi-r.1
for
121230390
ghi-r.1
for
121203422
ghi-r.1
for
107913925
cit-r.1
for
102630346
cit-r.1
for
102630886
gma-u.5
for
100793657
gma-u.5
for
100805701
gma-u.5
for
100807750
vvi-u.5
for
100254892
vvi-u.5
for
100245617
ppo-u.5
for
7490979
mtr-u.5
for
11431336
mtr-u.5
for
11430005
mtr-u.5
for
11430006
sly-u.5
for
101261801
sly-u.5
for
CycA2
sot-r.1
for
102604868
nta-r.1
for
107810034
nta-r.1
for
107786442
nta-r.1
for
107811824
osa-u.5
for
4352280
zma-u.5
for
100280697
zma-u.5
for
100285386
tae-r.2
for
123102772
tae-r.2
for
123063654
tae-r.2
for
123176985
hvu-r.1
for
123445663
sbi-r.1
for
8064979
bdi-r.1
for
100824825


Ortholog ID: 1246
Species bra bra bra bna bna ath ath ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo mtr mtr mtr sly sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC103842893 LOC103858695 LOC103846733 LOC106391323 LOC111197998 CYC3B CYCA2;4 LOC121230390 LOC107913925 LOC107897231 LOC102630346 LOC102630886 LOC100793657 LOC100805701 LOC100807750 LOC100254892 LOC100245617 LOC7490979 LOC7458999 LOC11431336 LOC11430005 LOC11430006 LOC101261801 CycA2 LOC102604868 LOC107786442 LOC107761856 LOC4352280 LOC100280697 LOC100285386 LOC123176985 LOC123072798 LOC123080961 LOC123445663 LOC8064979 LOC100824825
Function* cyclin-A2-3 cyclin-A2-4 cyclin-A2-2 cyclin-A2-2 cyclin-A2-4 mitotic-like cyclin 3B from Arabidopsi Cyclin A2;4 cyclin-A2-2 cyclin-A2-4 cyclin-A2-4 cyclin-A2-1 cyclin-A2-4 cyclin-A2-4 cyclin-A2-2 cyclin-A2-2 cyclin-A2-3 cyclin-A2-2 cyclin-A2-4 cyclin-A2-2 cyclin-A2-2 cyclin-A2-4 cyclin-A2-4 cyclin-A2-4 cyclin A2 cyclin-A2-2-like cyclin-A2-2-like cyclin-A2-2 cyclin-A2-1-like cyclin-A2 cyclin-A2 cyclin-A2-1 cyclin-A2-1 cyclin-A2-1 cyclin-A2-1-like cyclin-A2-1 cyclin-A2-1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 4
bra03420 Nucleotide excision repair 4
bra03430 Mismatch repair 4
bra03440 Homologous recombination 4
bra03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 3
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00620 Pyruvate metabolism 5
vvi01200 Carbon metabolism 5
vvi00061 Fatty acid biosynthesis 5
vvi01212 Fatty acid metabolism 5
vvi00010 Glycolysis / Gluconeogenesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04145 Phagosome 2
vvi04517 IgSF CAM signaling 2
vvi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 6
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 3
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04814 Motor proteins 4
bdi00270 Cysteine and methionine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103842893 103858695 103846733 106391323 111197998 831001 844377 121230390 107913925 107897231 102630346 102630886 100793657 100805701 100807750 100254892 100245617 7490979 7458999 11431336 11430005 11430006 101261801 543745 102604868 107786442 107761856 4352280 100280697 100285386 123176985 123072798 123080961 123445663 8064979 100824825
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