ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bra-r.6	103853284	uncharacterized LOC103853284
bra-r.6	103835274	plectin
bra-r.6	103840480	uncharacterized LOC103840480
bra-r.6	103830415	uncharacterized LOC103830415
bna-r.1	BNAC03G59170D	uncharacterized BNAC03G59170D
bna-r.1	106383054	uncharacterized LOC106383054
bna-r.1	BNAC07G09870D	uncharacterized BNAC07G09870D
ath-u.5	AT5G32440	Ubiquitin system component Cue protein
ath-u.5	AT1G80040	ubiquitin system component Cue
ghi-r.1	107889703	uncharacterized LOC107889703
ghi-r.1	107891039	uncharacterized LOC107891039
ghi-r.1	107907536	uncharacterized LOC107907536
cit-r.1	102621858	hypothetical protein
cit-r.1	102617708	uncharacterized LOC102617708
cit-r.1	102627853	hypothetical protein
gma-u.5	100813137	uncharacterized LOC100813137
gma-u.5	100809549	CUE domain-containing protein
gma-u.5	100791728	uncharacterized LOC100791728
vvi-u.5	100250980	uncharacterized LOC100250980
vvi-u.5	100247807	uncharacterized LOC100247807
vvi-u.5	100250952	uncharacterized LOC100250952
ppo-u.5	7459876	uncharacterized LOC7459876
ppo-u.5	7474679	uncharacterized LOC7474679
ppo-u.5	18099262	uncharacterized LOC18099262
mtr-u.5	11430702	uncharacterized LOC11430702
mtr-u.5	11420503	uncharacterized LOC11420503
sly-u.5	101249446	uncharacterized LOC101249446
sly-u.5	101260308	uncharacterized LOC101260308
sot-r.1	102598976	uncharacterized LOC102598976
sot-r.1	102595974	uncharacterized LOC102595974
sot-r.1	102579952	uncharacterized LOC102579952
nta-r.1	107766032	uncharacterized LOC107766032
nta-r.1	107828424	uncharacterized LOC107828424
nta-r.1	107819901	uncharacterized LOC107819901
osa-u.5	4341635	uncharacterized LOC4341635
osa-u.5	107277719	uncharacterized LOC107277719
osa-u.5	4346417	uncharacterized LOC4346417
zma-u.5	100283432	uncharacterized LOC100283432
zma-u.5	100282879	uncharacterized LOC100282879
zma-u.5	100282112	uncharacterized LOC100282112
tae-r.2	123061040	uncharacterized LOC123061040
tae-r.2	123103307	uncharacterized LOC123103307
hvu-r.1	123409059	uncharacterized LOC123409059
hvu-r.1	123401315	uncharacterized LOC123401315
sbi-r.1	8058395	uncharacterized LOC8058395
sbi-r.1	8077638	uncharacterized LOC8077638
bdi-r.1	100823885	uncharacterized LOC100823885
bdi-r.1	100825830	uncharacterized LOC100825830
bdi-r.1	100830187	uncharacterized LOC100830187
cre-r.1	CHLRE_11g480000v5	uncharacterized protein

Top 50 coexpressed genes to 103853284 (bra-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103853284 (bra-r.6 coexpression data)

CoexMap"103853284"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_009128455.1 [sequence] [blastp]
XP_033141553.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, chlo 4, plas 1, cysk 1, cysk_plas 1	(predict for XP_009128455.1)
nucl 5, chlo 4, plas 1, cysk 1, cysk_plas 1	(predict for XP_033141553.1)

Subcellular
localization
TargetP

chlo 5	(predict for XP_009128455.1)
chlo 5	(predict for XP_033141553.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 103853284	bra-r.6 for 103835274	bra-r.6 for 103840480	bra-r.6 for 103830415	bna-r.1 for BNAC03G59170D	bna-r.1 for 106383054	bna-r.1 for BNAC07G09870D	ath-u.5 for AT5G32440	ath-u.5 for AT1G80040	ghi-r.1 for 107889703	ghi-r.1 for 107891039	ghi-r.1 for 107907536	cit-r.1 for 102621858	cit-r.1 for 102617708	cit-r.1 for 102627853	gma-u.5 for 100813137	gma-u.5 for 100809549	gma-u.5 for 100791728	vvi-u.5 for 100250980	vvi-u.5 for 100247807	vvi-u.5 for 100250952	ppo-u.5 for 7459876	ppo-u.5 for 7474679	ppo-u.5 for 18099262	mtr-u.5 for 11430702	mtr-u.5 for 11420503	sly-u.5 for 101249446	sly-u.5 for 101260308	sot-r.1 for 102598976	sot-r.1 for 102595974	sot-r.1 for 102579952	nta-r.1 for 107766032	nta-r.1 for 107828424	nta-r.1 for 107819901	osa-u.5 for 4341635	osa-u.5 for 107277719	osa-u.5 for 4346417	zma-u.5 for 100283432	zma-u.5 for 100282879	zma-u.5 for 100282112	tae-r.2 for 123061040	tae-r.2 for 123103307	hvu-r.1 for 123409059	hvu-r.1 for 123401315	sbi-r.1 for 8058395	sbi-r.1 for 8077638	bdi-r.1 for 100823885	bdi-r.1 for 100825830	bdi-r.1 for 100830187	cre-r.1 for CHLRE_11g480000v5

Ortholog

Ortholog ID: 1046

Species

bra

bna

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

plectin

uncharacterized LOC103840480

uncharacterized LOC103830415

uncharacterized BNAC07G09870D

plectin-like

uncharacterized LOC106356311

Ubiquitin system component Cue protein

ubiquitin system component Cue

uncharacterized LOC107889703

uncharacterized LOC121225223

uncharacterized LOC107926849

hypothetical protein

uncharacterized LOC102617708

hypothetical protein

uncharacterized LOC100813137

CUE domain-containing protein

uncharacterized LOC100815998

uncharacterized LOC100250980

uncharacterized LOC100247807

uncharacterized LOC100250952

uncharacterized LOC7459876

uncharacterized LOC7474679

uncharacterized LOC18099262

uncharacterized LOC11430702

uncharacterized LOC11420503

uncharacterized LOC101249446

uncharacterized LOC101260308

uncharacterized LOC102598976

uncharacterized LOC102595974

uncharacterized LOC102603478

uncharacterized LOC107766032

uncharacterized LOC107786812

uncharacterized LOC107801106

uncharacterized LOC4346417

uncharacterized LOC9272364

uncharacterized LOC4328528

uncharacterized LOC100283432

uncharacterized LOC100282879

uncharacterized LOC100282112

uncharacterized LOC123136522

uncharacterized LOC123165704

uncharacterized LOC123149578

uncharacterized LOC123401315

uncharacterized LOC123397644

uncharacterized LOC8058395

uncharacterized LOC8077638

uncharacterized LOC100823885

uncharacterized LOC100825830

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04136	Autophagy - other	3
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03015	mRNA surveillance pathway	3
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03015	mRNA surveillance pathway	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00600	Sphingolipid metabolism	2
ath04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	4
ghi03272	Virion - Hepatitis viruses	2
ghi00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	2
ghi00510	N-Glycan biosynthesis	2
ghi00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03050	Proteasome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	3
gma04141	Protein processing in endoplasmic reticulum	3
gma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	3
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2
sly03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03015	mRNA surveillance pathway	4
sot04136	Autophagy - other	4
sot04382	Cornified envelope formation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00220	Arginine biosynthesis	2
sot01210	2-Oxocarboxylic acid metabolism	2
sot01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04626	Plant-pathogen interaction	6
nta04142	Lysosome	5
nta04016	MAPK signaling pathway - plant	4
nta04075	Plant hormone signal transduction	4
nta04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03020	RNA polymerase	4
osa03420	Nucleotide excision repair	4
osa03040	Spliceosome	2
osa03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00240	Pyrimidine metabolism	2
osa01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	6
zma03015	mRNA surveillance pathway	4
zma00513	Various types of N-glycan biosynthesis	4
zma00510	N-Glycan biosynthesis	3
zma00514	Other types of O-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00340	Histidine metabolism	3
tae00350	Tyrosine metabolism	3
tae00360	Phenylalanine metabolism	3
tae00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
tae00960	Tropane, piperidine and pyridine alkaloid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03020	RNA polymerase	3
hvu03420	Nucleotide excision repair	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	3
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	4
bdi00330	Arginine and proline metabolism	3
bdi00510	N-Glycan biosynthesis	3
bdi00513	Various types of N-glycan biosynthesis	3
bdi00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01230	Biosynthesis of amino acids	3
bdi00230	Purine metabolism	2
bdi00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

103835274

103840480

103830415

106376800

106361650

106356311

833203

844344

107889703

121225223

107926849

102621858

102617708

102627853

100813137

100809549

100815998

100250980

100247807

100250952

7459876

7474679

18099262

11430702

11420503

101249446

101260308

102598976

102595974

102603478

107766032

107786812

107801106

4346417

9272364

4328528

100283432

100282879

100282112

123136522

123165704

123149578

123401315

123397644

8058395

8077638

100823885

100825830

66055339

The preparation time of this page was 0.2 [sec].


Species	bra	bna	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	2	3	3	3	3	3	2	2	3	3	3	3	2	2	2	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103853284 (bra-r.6 coexpression data)

Top 50 enrichment test to 103853284 (bra-r.6 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**