ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bra-r.6	103853291	probable leucine-rich repeat receptor-like protein kinase At5g63930
bra-r.6	103865248	probable leucine-rich repeat receptor-like protein kinase At2g33170
bna-r.1	106447139	probable leucine-rich repeat receptor-like protein kinase At2g33170
bna-r.1	106390454	probable leucine-rich repeat receptor-like protein kinase At5g63930
bna-r.1	106388187	probable leucine-rich repeat receptor-like protein kinase At5g63930
ath-u.5	AT2G33170	Leucine-rich repeat receptor-like protein kinase family protein
ath-u.5	AT5G63930	Leucine-rich repeat protein kinase family protein
ghi-r.1	107890587	probable leucine-rich repeat receptor-like protein kinase At5g63930
ghi-r.1	107892130	probable leucine-rich repeat receptor-like protein kinase At5g63930
ghi-r.1	121206273	probable leucine-rich repeat receptor-like protein kinase At2g33170
cit-r.1	102615674	probable leucine-rich repeat receptor-like protein kinase At2g33170
cit-r.1	102631370	probable leucine-rich repeat receptor-like protein kinase At5g63930
gma-u.5	100807838	probable leucine-rich repeat receptor-like protein kinase At2g33170
gma-u.5	100805792	probable leucine-rich repeat receptor-like protein kinase At2g33170
vvi-u.5	100245888	probable leucine-rich repeat receptor-like protein kinase At2g33170
ppo-u.5	7487727	probable leucine-rich repeat receptor-like protein kinase At5g63930
ppo-u.5	7482772	probable leucine-rich repeat receptor-like protein kinase At2g33170
ppo-u.5	7481241	probable leucine-rich repeat receptor-like protein kinase At2g33170
mtr-u.5	25483133	probable leucine-rich repeat receptor-like protein kinase At2g33170
mtr-u.5	11431732	probable leucine-rich repeat receptor-like protein kinase At5g63930
sly-u.5	101252436	probable leucine-rich repeat receptor-like protein kinase At2g33170
sly-u.5	101265417	probable leucine-rich repeat receptor-like protein kinase At5g63930
sot-r.1	102593075	probable leucine-rich repeat receptor-like protein kinase At2g33170
nta-r.1	107828434	uncharacterized LOC107828434
nta-r.1	107813428	uncharacterized LOC107813428
nta-r.1	107769452	uncharacterized LOC107769452
osa-u.5	4336341	probable leucine-rich repeat receptor-like protein kinase At5g63930
zma-u.5	112136070	uncharacterized LOC112136070
hvu-r.1	123427191	probable leucine-rich repeat receptor-like protein kinase At5g63930
sbi-r.1	8060221	probable leucine-rich repeat receptor-like protein kinase At5g63930
bdi-r.1	100833973	probable leucine-rich repeat receptor-like protein kinase At5g63930

Top 50 coexpressed genes to 103853291 (bra-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103853291 (bra-r.6 coexpression data)

CoexMap"103853291"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0009755 [list] [network] hormone-mediated signaling pathway	(299 genes)	IEA
GO:0006468 [list] [network] protein phosphorylation	(1628 genes)	IEA

GO CC

GO:0005886 [list] [network] plasma membrane

(1422 genes)

IEA

GO MF

GO:0004672 [list] [network] protein kinase activity	(1670 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2916 genes)	IEA
GO:0005515 [list] [network] protein binding	(6277 genes)	IEA

Protein

XP_018511963.2 [sequence] [blastp]
XP_033141551.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 8, vacu 1, E.R. 1, golg 1, E.R._vacu 1	(predict for XP_018511963.2)
plas 8, vacu 1, E.R. 1, golg 1, E.R._vacu 1	(predict for XP_033141551.1)

Subcellular
localization
TargetP

scret 9	(predict for XP_018511963.2)
scret 9	(predict for XP_033141551.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 103853291	bra-r.6 for 103865248	bna-r.1 for 106447139	bna-r.1 for 106390454	bna-r.1 for 106388187	ath-u.5 for AT2G33170	ath-u.5 for AT5G63930	ghi-r.1 for 107890587	ghi-r.1 for 107892130	ghi-r.1 for 121206273	cit-r.1 for 102615674	cit-r.1 for 102631370	gma-u.5 for 100807838	gma-u.5 for 100805792	vvi-u.5 for 100245888	ppo-u.5 for 7487727	ppo-u.5 for 7482772	ppo-u.5 for 7481241	mtr-u.5 for 25483133	mtr-u.5 for 11431732	sly-u.5 for 101252436	sly-u.5 for 101265417	sot-r.1 for 102593075	nta-r.1 for 107828434	nta-r.1 for 107813428	nta-r.1 for 107769452	osa-u.5 for 4336341	zma-u.5 for 112136070	hvu-r.1 for 123427191	sbi-r.1 for 8060221	bdi-r.1 for 100833973

Ortholog

Ortholog ID: 5479

Species

bra

bna

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

hvu

sbi

bdi

Symbol

Function^*