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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103853623   serine/threonine-protein kinase VPS15 
 ath-u.5   VPS15   protein kinase family protein / WD-40 repeat family protein 
 gma-u.5   100818467   serine/threonine-protein kinase VPS15 
 gma-u.5   100796837   serine/threonine-protein kinase VPS15 
 vvi-u.5   100256057   serine/threonine-protein kinase VPS15 
 ppo-u.5   7497628   serine/threonine-protein kinase VPS15 
 mtr-u.5   25496990   serine/threonine-protein kinase VPS15 
 sly-u.5   101248472   serine/threonine-protein kinase VPS15 
 osa-u.5   4331010   serine/threonine-protein kinase VPS15 
 zma-u.5   103654173   uncharacterized LOC103654173 
 zma-u.5   103627860   serine/threonine-protein kinase VPS15 

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Top 50 coexpressed genes to 103853623 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103853623 (bra-r.6 coexpression data)

CoexMap"103853623"


braLOC103853623 | Entrez gene ID : 103853623    
Species bra ath gma vvi ppo mtr sly osa zma hvu bna cit ghi sbi bdi nta tae cre sot
Paralog 1 1 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp04136 [list] [network] Autophagy - other (61 genes)
GO BP
GO:0030242 [list] [network] autophagy of peroxisome  (5 genes)  IEA  
GO:0006623 [list] [network] protein targeting to vacuole  (16 genes)  IEA  
GO:0016236 [list] [network] macroautophagy  (58 genes)  IEA  
GO:0045324 [list] [network] late endosome to vacuole transport  (58 genes)  IEA  
GO:0006468 [list] [network] protein phosphorylation  (1628 genes)  IEA  
GO CC
GO:0071561 [list] [network] nucleus-vacuole junction  (1 genes)  IEA  
GO:0034271 [list] [network] phosphatidylinositol 3-kinase complex, class III, type I  (4 genes)  IEA  
GO:0034272 [list] [network] phosphatidylinositol 3-kinase complex, class III, type II  (4 genes)  IEA  
GO:0005770 [list] [network] late endosome  (56 genes)  IEA  
GO MF
GO:0004674 [list] [network] protein serine/threonine kinase activity  (496 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2916 genes)  IEA  
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_009128783.1 [sequence] [blastp]
XP_009128787.1 [sequence] [blastp]
XP_033128352.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  cysk 1,  cyto 1,  plas 1,  chlo_mito 1,  cyto_plas 1  (predict for XP_009128783.1)
nucl 6,  chlo 1,  cysk 1,  cyto 1,  plas 1,  chlo_mito 1,  cyto_plas 1  (predict for XP_009128787.1)
nucl 6,  chlo 1,  cysk 1,  cyto 1,  plas 1,  chlo_mito 1,  cyto_plas 1  (predict for XP_033128352.1)
Subcellular
localization
TargetP
other 7,  mito 4  (predict for XP_009128783.1)
other 7,  mito 4  (predict for XP_009128787.1)
other 7,  mito 4  (predict for XP_033128352.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103853623
ath-u.5
for
VPS15
gma-u.5
for
100818467
gma-u.5
for
100796837
vvi-u.5
for
100256057
ppo-u.5
for
7497628
mtr-u.5
for
25496990
sly-u.5
for
101248472
osa-u.5
for
4331010
zma-u.5
for
103654173
zma-u.5
for
103627860


Ortholog ID: 9611
Species bra bna bna ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma zma tae tae hvu sbi bdi cre
Symbol LOC103853623 LOC106385944 LOC111198296 VPS15 LOC107907182 LOC107958717 LOC102606643 LOC100818467 LOC100796837 LOC100256057 LOC7497628 LOC25496990 LOC101248472 LOC102588012 LOC107792939 LOC107796379 LOC4331010 LOC103654173 LOC103627860 LOC123139144 LOC123145921 LOC123405962 LOC8084642 LOC100829300 CHLRE_06g290500v5
Function* serine/threonine-protein kinase VPS15 serine/threonine-protein kinase VPS15-like serine/threonine-protein kinase VPS15 protein kinase family protein / WD-40 repeat family protein serine/threonine-protein kinase VPS15 serine/threonine-protein kinase VPS15 serine/threonine-protein kinase VPS15 serine/threonine-protein kinase VPS15 serine/threonine-protein kinase VPS15 serine/threonine-protein kinase VPS15 serine/threonine-protein kinase VPS15 serine/threonine-protein kinase VPS15 serine/threonine-protein kinase VPS15 probable serine/threonine-protein kinase vps15 phosphoinositide 3-kinase regulatory subunit 4-like serine/threonine-protein kinase VPS15 serine/threonine-protein kinase VPS15 uncharacterized LOC103654173 serine/threonine-protein kinase VPS15 serine/threonine-protein kinase VPS15 serine/threonine-protein kinase VPS15 serine/threonine-protein kinase VPS15 probable serine/threonine-protein kinase vps15 serine/threonine-protein kinase VPS15 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 4
bra04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 6
bna04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 6
bna00564 Glycerophospholipid metabolism 4
bna00565 Ether lipid metabolism 4
bna04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 5
ghi04141 Protein processing in endoplasmic reticulum 3
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 5
ghi04141 Protein processing in endoplasmic reticulum 3
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
cit04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 3
gma04120 Ubiquitin mediated proteolysis 2
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 5
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 3
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 4
sot04136 Autophagy - other 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 3
nta03040 Spliceosome 2
nta00564 Glycerophospholipid metabolism 2
nta00592 alpha-Linolenic acid metabolism 2
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 3
nta04075 Plant hormone signal transduction 3
nta04136 Autophagy - other 3
nta03040 Spliceosome 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 4
osa00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00562 Inositol phosphate metabolism 2
zma04070 Phosphatidylinositol signaling system 2
zma04145 Phagosome 2
zma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 5
zma04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 5
tae00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 5
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 4
hvu04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04136 Autophagy - other 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103853623 106385944 111198296 829059 107907182 107958717 102606643 100818467 100796837 100256057 7497628 25496990 101248472 102588012 107792939 107796379 4331010 103654173 103627860 123139144 123145921 123405962 8084642 100829300 66053806
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