ATTED-II : GeneCoexpression result

Species	Gene	Description
bra-r.6	103854938	40S ribosomal protein S19-3-like
ath-u.5	AT3G02080	Ribosomal protein S19e family protein
ath-u.5	AT5G15520	Ribosomal protein S19e family protein
ath-u.5	AT5G61170	Ribosomal protein S19e family protein
gma-u.5	100805469	40S ribosomal protein S19-1
gma-u.5	100527647	uncharacterized LOC100527647
gma-u.5	100305587	uncharacterized LOC100305587
vvi-u.5	100266271	small ribosomal subunit protein eS19z
vvi-u.5	100255295	small ribosomal subunit protein eS19x
ppo-u.5	7484566	40S ribosomal protein S19-3
ppo-u.5	18105726	40S ribosomal protein S19-3
ppo-u.5	7461178	40S ribosomal protein S19-3
mtr-u.5	25488609	40S ribosomal protein S19-3
mtr-u.5	11429530	40S ribosomal protein S19-1
sly-u.5	101249905	small ribosomal subunit protein eS19x
sly-u.5	101268656	small ribosomal subunit protein eS19x
osa-u.5	4333148	small ribosomal subunit protein eS19-like
osa-u.5	4333150	small ribosomal subunit protein eS19-like
zma-u.5	100192949	40S ribosomal protein S19-3
zma-u.5	103639054	40S ribosomal protein S19

Annotation

functional annotation

KEGG

brp03010 [list] [network] Ribosome (2036 genes)

GO BP

GO:0000028 [list] [network] ribosomal small subunit assembly	(60 genes)	IEA
GO:0006412 [list] [network] translation	(893 genes)	IEA

GO CC

GO:0022627 [list] [network] cytosolic small ribosomal subunit	(168 genes)	IEA
GO:0005840 [list] [network] ribosome	(658 genes)	IEA

GO MF

GO:0003735 [list] [network] structural constituent of ribosome	(649 genes)	IEA
GO:0003723 [list] [network] RNA binding	(1857 genes)	IEA

Protein

XP_009130152.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, pero 4, mito 1, extr 1

(predict for XP_009130152.2)

Subcellular
localization
TargetP

other 8

(predict for XP_009130152.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 103854938	ath-u.5 for AT3G02080	ath-u.5 for AT5G15520	ath-u.5 for AT5G61170	gma-u.5 for 100805469	gma-u.5 for 100527647	gma-u.5 for 100305587	vvi-u.5 for 100266271	vvi-u.5 for 100255295	ppo-u.5 for 7484566	ppo-u.5 for 18105726	ppo-u.5 for 7461178	mtr-u.5 for 25488609	mtr-u.5 for 11429530	sly-u.5 for 101249905	sly-u.5 for 101268656	osa-u.5 for 4333148	osa-u.5 for 4333150	zma-u.5 for 100192949	zma-u.5 for 103639054

Ortholog

Ortholog ID: 1742

Species

bra

bna

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

40S ribosomal protein S19-1

40S ribosomal protein S19-3-like

40S ribosomal protein S19-1

40S ribosomal protein S19-3

Ribosomal protein S19e family protein

40S ribosomal protein S19-3

40S ribosomal protein S19-1

40S ribosomal protein S19-3

uncharacterized LOC100527647

40S ribosomal protein S19

small ribosomal subunit protein eS19z

small ribosomal subunit protein eS19x

40S ribosomal protein S19-3

40S ribosomal protein S19-1

40S ribosomal protein S19-3

small ribosomal subunit protein eS19x

40S ribosomal protein S19-3-like

40S ribosomal protein S19-like

small ribosomal subunit protein eS19x-like

small ribosomal subunit protein eS19-like

40S ribosomal protein S19

40S ribosomal protein S19-3

40S ribosomal protein S19

ribosomal protein S19

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00999	Biosynthesis of various plant secondary metabolites	2
bra03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	12
ghi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	13
cit03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	18
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	17
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	17
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	17
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	19
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	12
nta03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	11
nta03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	9
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	19

Expression

Expression pattern

Entrez Gene ID^*

103842855

103854938

106438916

106439943

821120

836238

107887106

121229075

102616101

102627002

100527647

100499800

100266271

100255295

7461178

18105726

11429530

25488609

101249905

101268656

102604160

102577827

107808011

107800401

4333148

4333150

103639054

100192949

123120898

123103374

123452316

110431633

8057851

100831550

100834415

5725519

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 103854938 (bra-r.6 coexpression data)

Top 50 enrichment test to 103854938 (bra-r.6 coexpression data)


Species	bra	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	1	3	3	2	3	2	2	2	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103854938 (bra-r.6 coexpression data)

Top 50 enrichment test to 103854938 (bra-r.6 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**