ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bra-r.6	103855423	trihelix transcription factor GT-3a
bra-r.6	103857766	trihelix transcription factor GT-3b
bra-r.6	103867126	trihelix transcription factor GT-3b
bna-r.1	106433805	trihelix transcription factor GT-3a
bna-r.1	106442949	trihelix transcription factor GT-3a
ath-u.5	AT2G38250	Homeodomain-like superfamily protein
ath-u.5	AT5G01380	Homeodomain-like superfamily protein
ghi-r.1	107900719	trihelix transcription factor GT-3b-like
ghi-r.1	107899541	trihelix transcription factor GT-3b
ghi-r.1	107930125	trihelix transcription factor GT-3b
cit-r.1	102611213	trihelix transcription factor GT-3b
cit-r.1	102629358	trihelix transcription factor GT-3b
gma-u.5	100791013	trihelix transcription factor GT-3b
gma-u.5	100794230	trihelix transcription factor GT-3b
gma-u.5	100812635	trihelix transcription factor GT-3b
vvi-u.5	100259610	trihelix transcription factor GT-3b
vvi-u.5	100259062	trihelix transcription factor GT-3b
ppo-u.5	7487325	trihelix transcription factor GT-3b
ppo-u.5	7466076	trihelix transcription factor GT-3b
mtr-u.5	11413063	trihelix transcription factor GT-3b
mtr-u.5	11407412	trihelix transcription factor GT-3b
mtr-u.5	25498766	trihelix transcription factor GT-3b
sly-u.5	101253209	trihelix transcription factor GT-3b
sly-u.5	101249201	trihelix transcription factor GT-3b
sot-r.1	102589994	trihelix transcription factor GT-3b-like
sot-r.1	102591120	trihelix transcription factor GT-3b-like
nta-r.1	107783350	trihelix transcription factor GT-3b-like
osa-u.5	4337690	trihelix transcription factor GT-3b
zma-u.5	100283016	uncharacterized LOC100283016
zma-u.5	100384464	uncharacterized LOC100384464
zma-u.5	103629174	trihelix transcription factor GT-3b
tae-r.2	123046548	trihelix transcription factor GT-3a
tae-r.2	123054405	trihelix transcription factor GT-3a
tae-r.2	123109300	trihelix transcription factor GT-3a
hvu-r.1	123406311	trihelix transcription factor GT-3b-like
sbi-r.1	8072280	trihelix transcription factor GT-3b
sbi-r.1	8068166	trihelix transcription factor GT-3b
bdi-r.1	100826845	trihelix transcription factor GT-3b
bdi-r.1	100845756	trihelix transcription factor GT-3b

Top 50 coexpressed genes to 103855423 (bra-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103855423 (bra-r.6 coexpression data)

CoexMap""

[Cytoscape]

Annotation

functional annotation

Function

trihelix transcription factor GT-3a

KEGG

GO BP

GO CC

GO MF

Protein

XP_009130657.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, cyto_nucl 5

(predict for XP_009130657.1)

Subcellular
localization
TargetP

other 5, mito 4

(predict for XP_009130657.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 103855423	bra-r.6 for 103857766	bra-r.6 for 103867126	bna-r.1 for 106433805	bna-r.1 for 106442949	ath-u.5 for AT2G38250	ath-u.5 for AT5G01380	ghi-r.1 for 107900719	ghi-r.1 for 107899541	ghi-r.1 for 107930125	cit-r.1 for 102611213	cit-r.1 for 102629358	gma-u.5 for 100791013	gma-u.5 for 100794230	gma-u.5 for 100812635	vvi-u.5 for 100259610	vvi-u.5 for 100259062	ppo-u.5 for 7487325	ppo-u.5 for 7466076	mtr-u.5 for 11413063	mtr-u.5 for 11407412	mtr-u.5 for 25498766	sly-u.5 for 101253209	sly-u.5 for 101249201	sot-r.1 for 102589994	sot-r.1 for 102591120	nta-r.1 for 107783350	osa-u.5 for 4337690	zma-u.5 for 100283016	zma-u.5 for 100384464	zma-u.5 for 103629174	tae-r.2 for 123046548	tae-r.2 for 123054405	tae-r.2 for 123109300	hvu-r.1 for 123406311	sbi-r.1 for 8072280	sbi-r.1 for 8068166	bdi-r.1 for 100826845	bdi-r.1 for 100845756

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Ortholog

Ortholog ID: 2210

Species

bra

bna

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

trihelix transcription factor GT-3a