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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103856438   40S ribosomal protein S8-1 
 bra-r.6   103845690   40S ribosomal protein S8-1 
 bra-r.6   103851341   40S ribosomal protein S8-1 
 bna-r.1   125594530   40S ribosomal protein S8-1-like 
 bna-r.1   125596734   40S ribosomal protein S8-1-like 
 bna-r.1   106371762   40S ribosomal protein S8-1-like 
 ath-u.5   AT5G20290   Ribosomal protein S8e family protein 
 ath-u.5   AT5G59240   Ribosomal protein S8e family protein 
 ghi-r.1   107895223   40S ribosomal protein S8 
 ghi-r.1   107903432   40S ribosomal protein S8 
 ghi-r.1   107917832   40S ribosomal protein S8 
 cit-r.1   102626393   40S ribosomal protein S8-like 
 cit-r.1   102615250   40S ribosomal protein S8 
 gma-u.5   100794937   40S ribosomal protein S8 
 gma-u.5   100527325   40S ribosomal protein S8 
 gma-u.5   100803006   40S ribosomal protein S8 
 vvi-u.5   100257178   small ribosomal subunit protein eS8 
 vvi-u.5   100257147   small ribosomal subunit protein eS8 
 vvi-u.5   100854440   small ribosomal subunit protein eS8 
 ppo-u.5   7463832   40S ribosomal protein S8 
 ppo-u.5   18095365   40S ribosomal protein S8 
 ppo-u.5   7467347   40S ribosomal protein S8 
 mtr-u.5   25500268   40S ribosomal protein S8 
 mtr-u.5   25498194   40S ribosomal protein S8 
 mtr-u.5   11417220   40S ribosomal protein S8 
 sly-u.5   101250510   small ribosomal subunit protein eS8y 
 sly-u.5   101256398   small ribosomal subunit protein eS8 
 sly-u.5   101264059   small ribosomal subunit protein eS8 
 sot-r.1   102590439   40S ribosomal protein S8 
 sot-r.1   102584045   40S ribosomal protein S8-2 
 sot-r.1   102577693   uncharacterized LOC102577693 
 nta-r.1   107768559   small ribosomal subunit protein eS8 
 nta-r.1   107771534   small ribosomal subunit protein eS8-like 
 nta-r.1   107776903   small ribosomal subunit protein eS8 
 osa-u.5   4335547   small ribosomal subunit protein eS8-like 
 osa-u.5   4329381   40S ribosomal protein S8-like 
 zma-u.5   100193830   40S ribosomal protein S8-like 
 zma-u.5   542341   ribosomal protein S8 
 zma-u.5   103654822   40S ribosomal protein S8 
 tae-r.2   123053083   40S ribosomal protein S8 
 tae-r.2   123188990   40S ribosomal protein S8 
 tae-r.2   123045250   40S ribosomal protein S8 
 hvu-r.1   123426468   40S ribosomal protein S8 
 sbi-r.1   8068608   40S ribosomal protein S8 
 sbi-r.1   8085785   40S ribosomal protein S8 
 bdi-r.1   100842054   40S ribosomal protein S8 
 bdi-r.1   100832177   40S ribosomal protein S8 
 cre-r.1   CHLRE_06g272800v5   ribosomal protein S8 

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Top 50 coexpressed genes to 103856438 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103856438 (bra-r.6 coexpression data)

CoexMap"103856438"


braLOC103856438 | Entrez gene ID : 103856438    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 3 2 3 2 3 3 3 3 3 3 3 2 3 3 1 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp03010 [list] [network] Ribosome (2036 genes)
GO BP
GO:0000462 [list] [network] maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (68 genes)  IEA  
GO:0006412 [list] [network] translation  (893 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (168 genes)  IEA  
GO:0005840 [list] [network] ribosome  (658 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (649 genes)  IEA  
Protein XP_009131790.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 3,  cyto 2  (predict for XP_009131790.1)
Subcellular
localization
TargetP
other 4,  mito 3,  chlo 3  (predict for XP_009131790.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103856438
bra-r.6
for
103845690
bra-r.6
for
103851341
bna-r.1
for
125594530
bna-r.1
for
125596734
bna-r.1
for
106371762
ath-u.5
for
AT5G20290
ath-u.5
for
AT5G59240
ghi-r.1
for
107895223
ghi-r.1
for
107903432
ghi-r.1
for
107917832
cit-r.1
for
102626393
cit-r.1
for
102615250
gma-u.5
for
100794937
gma-u.5
for
100527325
gma-u.5
for
100803006
vvi-u.5
for
100257178
vvi-u.5
for
100257147
vvi-u.5
for
100854440
ppo-u.5
for
7463832
ppo-u.5
for
18095365
ppo-u.5
for
7467347
mtr-u.5
for
25500268
mtr-u.5
for
25498194
mtr-u.5
for
11417220
sly-u.5
for
101250510
sly-u.5
for
101256398
sly-u.5
for
101264059
sot-r.1
for
102590439
sot-r.1
for
102584045
sot-r.1
for
102577693
nta-r.1
for
107768559
nta-r.1
for
107771534
nta-r.1
for
107776903
osa-u.5
for
4335547
osa-u.5
for
4329381
zma-u.5
for
100193830
zma-u.5
for
542341
zma-u.5
for
103654822
tae-r.2
for
123053083
tae-r.2
for
123188990
tae-r.2
for
123045250
hvu-r.1
for
123426468
sbi-r.1
for
8068608
sbi-r.1
for
8085785
bdi-r.1
for
100842054
bdi-r.1
for
100832177
cre-r.1
for
CHLRE_06g272800v5


Ortholog ID: 1437
Species bra bra bra bna bna bna ath ath ghi ghi ghi cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa zma zma zma tae tae tae hvu sbi sbi bdi bdi cre
Symbol LOC103856438 LOC103845690 LOC103851341 LOC125596734 LOC106386692 LOC106439493 AT5G20290 AT5G59240 LOC107917832 LOC107918866 LOC107920648 LOC102626393 LOC102615250 LOC100794937 LOC100813170 LOC100527664 LOC100257178 LOC100257147 LOC100854440 LOC18095365 LOC7467347 LOC18107421 LOC25500268 LOC25498194 LOC11417220 LOC101264059 LOC101267653 LOC101254603 LOC102577693 LOC102577526 LOC102593985 LOC107805570 LOC107820620 LOC107760240 LOC4335547 LOC4329381 LOC100193830 LOC542341 LOC103654822 LOC123053083 LOC123188990 LOC123045250 LOC123426468 LOC8068608 LOC8085785 LOC100842054 LOC100832177 CHLRE_06g272800v5
Function* 40S ribosomal protein S8-1 40S ribosomal protein S8-1 40S ribosomal protein S8-1 40S ribosomal protein S8-1-like 40S ribosomal protein S8-1 40S ribosomal protein S8-1 Ribosomal protein S8e family protein Ribosomal protein S8e family protein 40S ribosomal protein S8 40S ribosomal protein S8 40S ribosomal protein S8 40S ribosomal protein S8-like 40S ribosomal protein S8 40S ribosomal protein S8 40S ribosomal protein S8 40S ribosomal protein S8 small ribosomal subunit protein eS8 small ribosomal subunit protein eS8 small ribosomal subunit protein eS8 40S ribosomal protein S8 40S ribosomal protein S8 40S ribosomal protein S8 40S ribosomal protein S8 40S ribosomal protein S8 40S ribosomal protein S8 small ribosomal subunit protein eS8 small ribosomal subunit protein eS8 small ribosomal subunit protein eS8 uncharacterized LOC102577693 putative 40S ribosomal protein S8-like protein 40S ribosomal protein S8-like small ribosomal subunit protein eS8-like small ribosomal subunit protein eS8 small ribosomal subunit protein eS8 small ribosomal subunit protein eS8-like 40S ribosomal protein S8-like 40S ribosomal protein S8-like ribosomal protein S8 40S ribosomal protein S8 40S ribosomal protein S8 40S ribosomal protein S8 40S ribosomal protein S8 40S ribosomal protein S8 40S ribosomal protein S8 40S ribosomal protein S8 40S ribosomal protein S8 40S ribosomal protein S8 ribosomal protein S8
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 17
bra00230 Purine metabolism 2
bra00240 Pyrimidine metabolism 2
bra01232 Nucleotide metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 5
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi00020 Citrate cycle (TCA cycle) 5
ghi01200 Carbon metabolism 5
ghi01210 2-Oxocarboxylic acid metabolism 5
ghi00010 Glycolysis / Gluconeogenesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 14
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta03015 mRNA surveillance pathway 2
nta03018 RNA degradation 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 21
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103856438 103845690 103851341 125596734 106386692 106439493 832151 836042 107917832 107918866 107920648 102626393 102615250 100794937 100813170 100527664 100257178 100257147 100854440 18095365 7467347 18107421 25500268 25498194 11417220 101264059 101267653 101254603 102577693 102577526 102593985 107805570 107820620 107760240 4335547 4329381 100193830 542341 103654822 123053083 123188990 123045250 123426468 8068608 8085785 100842054 100832177 5721805
The preparation time of this page was 1.4 [sec].