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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103856952   KH domain-containing protein At5g56140 
 bra-r.6   103861632   KH domain-containing protein At4g26480 
 bra-r.6   103866225   KH domain-containing protein At4g26480 
 bra-r.6   103845049   KH domain-containing protein At5g56140 
 bna-r.1   106445233   KH domain-containing protein At4g26480 
 bna-r.1   106444085   KH domain-containing protein At4g26480 
 bna-r.1   106440887   KH domain-containing protein At4g26480 
 ath-u.5   AT4G26480   RNA-binding KH domain-containing protein 
 ath-u.5   AT5G56140   RNA-binding KH domain-containing protein 
 ghi-r.1   107903397   KH domain-containing protein At5g56140 
 ghi-r.1   107927262   KH domain-containing protein At5g56140 
 ghi-r.1   107931156   KH domain-containing protein At5g56140 
 cit-r.1   102626297   KH domain-containing protein At5g56140 
 gma-u.5   100790630   KH domain-containing protein At5g56140 
 gma-u.5   100789866   KH domain-containing protein At5g56140 
 vvi-u.5   100246386   RNA-binding KH domain-containing-like 
 ppo-u.5   18103562   KH domain-containing protein At5g56140 
 ppo-u.5   7471710   KH domain-containing protein At5g56140 
 mtr-u.5   11422411   KH domain-containing protein At5g56140 
 sly-u.5   101265255   KH domain-containing protein At5g56140 
 sot-r.1   102596196   KH domain-containing protein At5g56140 
 nta-r.1   107759124   KH domain-containing protein At5g56140 
 osa-u.5   4330567   KH domain-containing protein At5g56140 
 zma-u.5   100194222   KH domain-containing protein 
 zma-u.5   100273249   uncharacterized LOC100273249 
 tae-r.2   123145335   KH domain-containing protein At5g56140 
 tae-r.2   123138071   KH domain-containing protein At5g56140 
 tae-r.2   123128237   KH domain-containing protein At5g56140 
 hvu-r.1   123401377   KH domain-containing protein At5g56140-like 
 sbi-r.1   8077719   KH domain-containing protein At5g56140 
 bdi-r.1   100832475   KH domain-containing protein At5g56140 
 bdi-r.1   100831248   KH domain-containing protein At5g56140 

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Top 50 coexpressed genes to 103856952 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103856952 (bra-r.6 coexpression data)

CoexMap"103856952"


braLOC103856952 | Entrez gene ID : 103856952    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 2 3 1 2 1 2 1 1 1 1 1 2 3 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048024 [list] [network] regulation of mRNA splicing, via spliceosome  (33 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (4801 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (432 genes)  IEA  
Protein XP_009132341.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  mito 1  (predict for XP_009132341.1)
Subcellular
localization
TargetP
mito 5,  other 3  (predict for XP_009132341.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103856952
bra-r.6
for
103861632
bra-r.6
for
103866225
bra-r.6
for
103845049
bna-r.1
for
106445233
bna-r.1
for
106444085
bna-r.1
for
106440887
ath-u.5
for
AT4G26480
ath-u.5
for
AT5G56140
ghi-r.1
for
107903397
ghi-r.1
for
107927262
ghi-r.1
for
107931156
cit-r.1
for
102626297
gma-u.5
for
100790630
gma-u.5
for
100789866
vvi-u.5
for
100246386
ppo-u.5
for
18103562
ppo-u.5
for
7471710
mtr-u.5
for
11422411
sly-u.5
for
101265255
sot-r.1
for
102596196
nta-r.1
for
107759124
osa-u.5
for
4330567
zma-u.5
for
100194222
zma-u.5
for
100273249
tae-r.2
for
123145335
tae-r.2
for
123138071
tae-r.2
for
123128237
hvu-r.1
for
123401377
sbi-r.1
for
8077719
bdi-r.1
for
100832475
bdi-r.1
for
100831248


Ortholog ID: 5151
Species bra bra bra bna bna bna ath ath ghi ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta osa zma zma tae tae tae hvu sbi bdi bdi
Symbol LOC103856952 LOC103861632 LOC103866225 LOC106444085 LOC106402306 LOC106383381 AT4G26480 AT5G56140 LOC107903397 LOC107931156 LOC121223383 LOC102626297 LOC100790630 LOC100789866 LOC100246386 LOC18103562 LOC7471710 LOC11422411 LOC101265255 LOC102596196 LOC107759124 LOC4330567 LOC100194222 LOC100273249 LOC123145335 LOC123138071 LOC123128237 LOC123401377 LOC8077719 LOC100832475 LOC100831248
Function* KH domain-containing protein At5g56140 KH domain-containing protein At4g26480 KH domain-containing protein At4g26480 KH domain-containing protein At4g26480 KH domain-containing protein At5g56140-like KH domain-containing protein At5g56140 RNA-binding KH domain-containing protein RNA-binding KH domain-containing protein KH domain-containing protein At5g56140 KH domain-containing protein At5g56140 KH domain-containing protein At5g56140 KH domain-containing protein At5g56140 KH domain-containing protein At5g56140 KH domain-containing protein At5g56140 RNA-binding KH domain-containing-like KH domain-containing protein At5g56140 KH domain-containing protein At5g56140 KH domain-containing protein At5g56140 KH domain-containing protein At5g56140 KH domain-containing protein At5g56140 KH domain-containing protein At5g56140 KH domain-containing protein At5g56140 KH domain-containing protein uncharacterized LOC100273249 KH domain-containing protein At5g56140 KH domain-containing protein At5g56140 KH domain-containing protein At5g56140 KH domain-containing protein At5g56140-like KH domain-containing protein At5g56140 KH domain-containing protein At5g56140 KH domain-containing protein At5g56140
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 5
bra04145 Phagosome 5
bra04142 Lysosome 2
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00520 Amino sugar and nucleotide sugar metabolism 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 4
gma03083 Polycomb repressive complex 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04130 SNARE interactions in vesicular transport 3
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00030 Pentose phosphate pathway 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00600 Sphingolipid metabolism 3
nta04382 Cornified envelope formation 3
nta03040 Spliceosome 3
nta03015 mRNA surveillance pathway 2
nta00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 2
tae00053 Ascorbate and aldarate metabolism 2
tae00520 Amino sugar and nucleotide sugar metabolism 2
tae01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103856952 103861632 103866225 106444085 106402306 106383381 828754 835713 107903397 107931156 121223383 102626297 100790630 100789866 100246386 18103562 7471710 11422411 101265255 102596196 107759124 4330567 100194222 100273249 123145335 123138071 123128237 123401377 8077719 100832475 100831248
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