ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bra-r.6	103858620	protein transport Sec1b
bra-r.6	103872012	SNARE-interacting protein KEULE
bra-r.6	103843821	protein transport Sec1a
bra-r.6	103839904	protein transport Sec1b
bna-r.1	106385589	protein transport Sec1b
bna-r.1	106416514	protein transport Sec1b-like
bna-r.1	106367032	protein transport Sec1b
ath-u.5	SEC1B	Sec1/munc18-like (SM) proteins superfamily
ath-u.5	KEU	Sec1/munc18-like (SM) proteins superfamily
ath-u.5	SEC1A	secretory 1A
ghi-r.1	107936414	SNARE-interacting protein KEULE
ghi-r.1	107946957	SNARE-interacting protein KEULE
ghi-r.1	107931301	SNARE-interacting protein KEULE
cit-r.1	102606722	SNARE-interacting protein KEULE-like
cit-r.1	102621596	SNARE-interacting protein KEULE-like
gma-u.5	100778770	SNARE-interacting protein KEULE
gma-u.5	100783306	SNARE-interacting protein KEULE
vvi-u.5	100258197	SNARE-interacting protein KEULE
vvi-u.5	100248925	protein transport Sec1a
ppo-u.5	7465807	SNARE-interacting protein KEULE
ppo-u.5	18094410	SNARE-interacting protein KEULE
mtr-u.5	11406385	SNARE-interacting protein KEULE
mtr-u.5	11441043	SNARE-interacting protein KEULE
sly-u.5	101263140	SNARE-interacting protein KEULE
sly-u.5	101251922	protein transport Sec1a
sot-r.1	102578613	SNARE-interacting protein KEULE-like
nta-r.1	107806541	SNARE-interacting protein KEULE
osa-u.5	4329266	probable protein transport Sec1a
osa-u.5	4335313	probable protein transport Sec1a
osa-u.5	4340037	probable protein transport Sec1b
zma-u.5	100280502	SNARE-interacting protein KEULE
zma-u.5	100285241	SNARE-interacting protein KEULE
zma-u.5	103638116	probable protein transport Sec1b
tae-r.2	123127423	probable protein transport Sec1a
tae-r.2	123187188	probable protein transport Sec1a
tae-r.2	123137238	probable protein transport Sec1a
hvu-r.1	123424543	probable protein transport Sec1a
hvu-r.1	123404202	probable protein transport Sec1a
sbi-r.1	8085760	probable protein transport Sec1a
sbi-r.1	8081667	probable protein transport Sec1a
sbi-r.1	8068408	probable protein transport Sec1b
bdi-r.1	100835188	probable protein transport Sec1a
bdi-r.1	100835060	probable protein transport Sec1a
bdi-r.1	100836060	probable protein transport Sec1b
cre-r.1	CHLRE_11g467699v5	uncharacterized protein

Top 50 coexpressed genes to 103858620 (bra-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103858620 (bra-r.6 coexpression data)

CoexMap"103858620"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006904 [list] [network] vesicle docking involved in exocytosis	(24 genes)	IEA
GO:0006886 [list] [network] intracellular protein transport	(422 genes)	IEA
GO:0016192 [list] [network] vesicle-mediated transport	(699 genes)	IEA

GO CC

GO:0030141 [list] [network] secretory granule	(5 genes)	IEA
GO:0005886 [list] [network] plasma membrane	(1422 genes)	IEA

GO MF

GO:0019905 [list] [network] syntaxin binding

(19 genes)

IEA

Protein

XP_009134254.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, nucl 4, chlo 1, vacu 1

(predict for XP_009134254.1)

Subcellular
localization
TargetP

other 6, chlo 3

(predict for XP_009134254.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 103858620	bra-r.6 for 103872012	bra-r.6 for 103843821	bra-r.6 for 103839904	bna-r.1 for 106385589	bna-r.1 for 106416514	bna-r.1 for 106367032	ath-u.5 for SEC1B	ath-u.5 for KEU	ath-u.5 for SEC1A	ghi-r.1 for 107936414	ghi-r.1 for 107946957	ghi-r.1 for 107931301	cit-r.1 for 102606722	cit-r.1 for 102621596	gma-u.5 for 100778770	gma-u.5 for 100783306	vvi-u.5 for 100258197	vvi-u.5 for 100248925	ppo-u.5 for 7465807	ppo-u.5 for 18094410	mtr-u.5 for 11406385	mtr-u.5 for 11441043	sly-u.5 for 101263140	sly-u.5 for 101251922	sot-r.1 for 102578613	nta-r.1 for 107806541	osa-u.5 for 4329266	osa-u.5 for 4335313	osa-u.5 for 4340037	zma-u.5 for 100280502	zma-u.5 for 100285241	zma-u.5 for 103638116	tae-r.2 for 123127423	tae-r.2 for 123187188	tae-r.2 for 123137238	hvu-r.1 for 123424543	hvu-r.1 for 123404202	sbi-r.1 for 8085760	sbi-r.1 for 8081667	sbi-r.1 for 8068408	bdi-r.1 for 100835188	bdi-r.1 for 100835060	bdi-r.1 for 100836060	cre-r.1 for CHLRE_11g467699v5

Ortholog

Ortholog ID: 1760

Species

bra

bna

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

SEC1B

KEU

SEC1A

Function^*