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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103858977   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 
 bra-r.6   103856943   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 
 bra-r.6   103856197   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 
 bna-r.1   125574833   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 
 bna-r.1   125580819   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 
 bna-r.1   125583346   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 
 ath-u.5   AT3G02770   Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase 
 ath-u.5   AT5G16450   Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase 
 ath-u.5   AT5G56260   Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase 
 ghi-r.1   107888923   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 
 ghi-r.1   107959403   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 
 ghi-r.1   107944541   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 
 cit-r.1   102619693   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 
 cit-r.1   102623345   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 
 gma-u.5   100789908   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 
 gma-u.5   100783612   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 
 gma-u.5   100500691   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 
 vvi-u.5   100256628   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 
 vvi-u.5   100263339   regulator of ribonuclease-like protein 2 
 ppo-u.5   18104232   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 
 ppo-u.5   18103576   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 
 ppo-u.5   7459221   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 
 mtr-u.5   11410288   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 
 mtr-u.5   25485895   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 
 mtr-u.5   11418846   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 
 sly-u.5   101250931   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 
 sly-u.5   101260124   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 
 sot-r.1   102599082   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 
 sot-r.1   102584527   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 
 nta-r.1   107828905   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 
 nta-r.1   107824552   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 
 nta-r.1   107818859   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 
 osa-u.5   4324667   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 
 osa-u.5   4330812   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 
 zma-u.5   100283919   regulator of ribonuclease activity A 
 zma-u.5   100281920   uncharacterized LOC100281920 
 hvu-r.1   123410661   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 
 hvu-r.1   123407443   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 
 sbi-r.1   8067495   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 
 sbi-r.1   8060782   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 
 sbi-r.1   110431029   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 
 bdi-r.1   100835195   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 
 bdi-r.1   100836315   putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 
 cre-r.1   CHLRE_13g578150v5   uncharacterized protein 

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Top 50 coexpressed genes to 103858977 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103858977 (bra-r.6 coexpression data)

CoexMap"103858977"


braLOC103858977 | Entrez gene ID : 103858977    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma hvu sbi bdi cre tae
Paralog 3 3 3 3 2 3 2 3 3 2 2 3 2 2 2 3 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0051252 [list] [network] regulation of RNA metabolic process  (2715 genes)  IEA  
GO CC
GO MF
GO:0008428 [list] [network] ribonuclease inhibitor activity  (5 genes)  IEA  
Protein XP_009134698.1 [sequence] [blastp]
XP_009134699.1 [sequence] [blastp]
XP_009134700.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  extr 2,  chlo 1,  nucl 1,  golg 1,  chlo_mito 1  (predict for XP_009134698.1)
cyto 5,  extr 2,  chlo 1,  nucl 1,  golg 1,  chlo_mito 1  (predict for XP_009134699.1)
cyto 5,  extr 2,  chlo 1,  nucl 1,  golg 1,  chlo_mito 1  (predict for XP_009134700.1)
Subcellular
localization
TargetP
other 5  (predict for XP_009134698.1)
other 5  (predict for XP_009134699.1)
other 5  (predict for XP_009134700.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103858977
bra-r.6
for
103856943
bra-r.6
for
103856197
bna-r.1
for
125574833
bna-r.1
for
125580819
bna-r.1
for
125583346
ath-u.5
for
AT3G02770
ath-u.5
for
AT5G16450
ath-u.5
for
AT5G56260
ghi-r.1
for
107888923
ghi-r.1
for
107959403
ghi-r.1
for
107944541
cit-r.1
for
102619693
cit-r.1
for
102623345
gma-u.5
for
100789908
gma-u.5
for
100783612
gma-u.5
for
100500691
vvi-u.5
for
100256628
vvi-u.5
for
100263339
ppo-u.5
for
18104232
ppo-u.5
for
18103576
ppo-u.5
for
7459221
mtr-u.5
for
11410288
mtr-u.5
for
25485895
mtr-u.5
for
11418846
sly-u.5
for
101250931
sly-u.5
for
101260124
sot-r.1
for
102599082
sot-r.1
for
102584527
nta-r.1
for
107828905
nta-r.1
for
107824552
nta-r.1
for
107818859
osa-u.5
for
4324667
osa-u.5
for
4330812
zma-u.5
for
100283919
zma-u.5
for
100281920
hvu-r.1
for
123410661
hvu-r.1
for
123407443
sbi-r.1
for
8067495
sbi-r.1
for
8060782
sbi-r.1
for
110431029
bdi-r.1
for
100835195
bdi-r.1
for
100836315
cre-r.1
for
CHLRE_13g578150v5


Ortholog ID: 1661
Species bra bra bna bna bna ath ath ath ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sot sot nta nta nta osa osa zma zma tae tae hvu hvu sbi sbi sbi bdi bdi cre
Symbol LOC103858977 LOC103856943 LOC125580819 LOC106389532 LOC106429197 AT3G02770 AT5G16450 AT5G56260 LOC107888923 LOC107944541 LOC107926319 LOC102619693 LOC102623345 LOC100789908 LOC100500691 LOC100500019 LOC100256628 LOC100263339 LOC18104232 LOC18103576 LOC7459221 LOC11410288 LOC25485895 LOC11418846 LOC101250931 LOC101260124 LOC102599082 LOC102584527 LOC107824552 LOC107818859 LOC107770371 LOC4324667 LOC4330812 LOC100283919 LOC100281920 LOC123149849 LOC123149851 LOC123410661 LOC123407443 LOC8067495 LOC8060782 LOC110431029 LOC100835195 LOC100836315 CHLRE_13g578150v5
Function* putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 ribonuclease activity regulator protein RraA-like putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 regulator of ribonuclease-like protein 2 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 regulator of ribonuclease activity A uncharacterized LOC100281920 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 3
bra04120 Ubiquitin mediated proteolysis 3
bra04141 Protein processing in endoplasmic reticulum 3
bra04016 MAPK signaling pathway - plant 3
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
ath00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 4
ghi00040 Pentose and glucuronate interconversions 3
ghi00051 Fructose and mannose metabolism 3
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 8
cit04142 Lysosome 3
cit04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 2
gma00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00440 Phosphonate and phosphinate metabolism 2
gma00564 Glycerophospholipid metabolism 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00230 Purine metabolism 3
vvi00240 Pyrimidine metabolism 2
vvi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo00970 Aminoacyl-tRNA biosynthesis 3
ppo03013 Nucleocytoplasmic transport 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 5
ppo03083 Polycomb repressive complex 2
ppo04120 Ubiquitin mediated proteolysis 2
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 4
mtr03082 ATP-dependent chromatin remodeling 3
mtr04016 MAPK signaling pathway - plant 3
mtr04070 Phosphatidylinositol signaling system 3
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
mtr00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 6
sly04145 Phagosome 6
sly04142 Lysosome 5
sly04070 Phosphatidylinositol signaling system 3
sly04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 6
sot04070 Phosphatidylinositol signaling system 6
sot04075 Plant hormone signal transduction 6
sot04626 Plant-pathogen interaction 6
sot04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 2
nta03060 Protein export 2
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 2
nta03060 Protein export 2
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
nta01230 Biosynthesis of amino acids 4
nta00270 Cysteine and methionine metabolism 4
nta00900 Terpenoid backbone biosynthesis 2
nta00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 4
osa03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 2
zma01200 Carbon metabolism 2
zma01230 Biosynthesis of amino acids 2
zma04146 Peroxisome 2
zma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 4
zma04145 Phagosome 4
zma00620 Pyruvate metabolism 2
zma00561 Glycerolipid metabolism 2
zma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 12
tae00030 Pentose phosphate pathway 3
tae00040 Pentose and glucuronate interconversions 3
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
hvu04141 Protein processing in endoplasmic reticulum 2
hvu04144 Endocytosis 2
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 4
sbi03083 Polycomb repressive complex 2
sbi04120 Ubiquitin mediated proteolysis 2
sbi03420 Nucleotide excision repair 2
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00240 Pyrimidine metabolism 2
sbi00410 beta-Alanine metabolism 2
sbi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 6
sbi04145 Phagosome 5
sbi04142 Lysosome 4
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04146 Peroxisome 3
cre00071 Fatty acid degradation 2
cre01212 Fatty acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103858977 103856943 125580819 106389532 106429197 820949 831506 835725 107888923 107944541 107926319 102619693 102623345 100789908 100500691 100500019 100256628 100263339 18104232 18103576 7459221 11410288 25485895 11418846 101250931 101260124 102599082 102584527 107824552 107818859 107770371 4324667 4330812 100283919 100281920 123149849 123149851 123410661 123407443 8067495 8060782 110431029 100835195 100836315 5719272
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