ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bra-r.6	103859538	chaperonin CPN60-like 2, mitochondrial
bra-r.6	103857477	chaperonin CPN60, mitochondrial
bra-r.6	103860022	chaperonin CPN60, mitochondrial
bna-r.1	125580922	chaperonin CPN60-like 2, mitochondrial
bna-r.1	125607041	chaperonin CPN60, mitochondrial-like
bna-r.1	106367470	chaperonin CPN60-like 1, mitochondrial
ath-u.5	HSP60-2	heat shock protein 60-2
ath-u.5	HSP60-3A	heat shock protein 60-3A
ath-u.5	HSP60	heat shock protein 60
ghi-r.1	107924713	chaperonin CPN60-2, mitochondrial
ghi-r.1	107944216	chaperonin CPN60-2, mitochondrial
ghi-r.1	107906100	chaperonin CPN60-like 2, mitochondrial
cit-r.1	102627200	chaperonin CPN60-like 2, mitochondrial
cit-r.1	102620413	chaperonin CPN60-2, mitochondrial
gma-u.5	100787285	chaperonin CPN60-like 2, mitochondrial
gma-u.5	100788248	chaperonin CPN60-2, mitochondrial
gma-u.5	100818544	chaperonin CPN60-2, mitochondrial
vvi-u.5	100244356	chaperonin CPN60
vvi-u.5	100266920	chaperonin CPN60-like 2, mitochondrial
ppo-u.5	7471193	chaperonin CPN60-2, mitochondrial
ppo-u.5	18097124	chaperonin CPN60-2, mitochondrial
ppo-u.5	18096818	chaperonin CPN60-like 2, mitochondrial
mtr-u.5	11417778	chaperonin CPN60-2, mitochondrial
mtr-u.5	11417779	chaperonin CPN60-2, mitochondrial
mtr-u.5	11421237	chaperonin CPN60-like 2, mitochondrial
sly-u.5	101265626	chaperonin CPN60-like 2, mitochondrial
sly-u.5	101263320	chaperonin CPN60-2, mitochondrial
sly-u.5	101250927	chaperonin CPN60-2, mitochondrial
sot-r.1	102582102	chaperonin CPN60-2, mitochondrial
sot-r.1	102586554	chaperonin CPN60-like 2, mitochondrial
sot-r.1	102590709	chaperonin CPN60-2, mitochondrial
nta-r.1	107794731	chaperonin CPN60-2, mitochondrial
nta-r.1	107770118	chaperonin CPN60-2, mitochondrial
nta-r.1	107767906	chaperonin CPN60-like 2, mitochondrial
osa-u.5	4348824	chaperonin CPN60-1, mitochondrial
osa-u.5	4339466	chaperonin CPN60-like 2, mitochondrial
osa-u.5	4331590	chaperonin CPN60-1, mitochondrial
zma-u.5	100272259	Chaperonin CPN60-like 2 mitochondrial
zma-u.5	542707	mitochondrial chaperonin 60
zma-u.5	542736	mitochondrial chaperonin-60
tae-r.2	123182817	chaperonin CPN60-like 2, mitochondrial
tae-r.2	123065123	chaperonin CPN60-like 2, mitochondrial
tae-r.2	123088118	chaperonin CPN60-1, mitochondrial
hvu-r.1	123430302	chaperonin CPN60-1, mitochondrial
hvu-r.1	123448213	chaperonin CPN60-like 2, mitochondrial
hvu-r.1	123449681	chaperonin CPN60-1, mitochondrial-like
sbi-r.1	8059266	chaperonin CPN60-1, mitochondrial
sbi-r.1	8061075	chaperonin CPN60-like 2, mitochondrial
bdi-r.1	100833521	chaperonin CPN60-1, mitochondrial
bdi-r.1	100825736	chaperonin CPN60-1, mitochondrial
bdi-r.1	100825912	chaperonin CPN60-like 2, mitochondrial
cre-r.1	CHLRE_06g309100v5	uncharacterized protein

Top 50 coexpressed genes to 103859538 (bra-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103859538 (bra-r.6 coexpression data)

CoexMap"103859538"

[Cytoscape]

Annotation

functional annotation

KEGG

brp03018 [list] [network] RNA degradation (187 genes)

GO BP

GO:0042026 [list] [network] protein refolding

(59 genes)

IEA

GO CC

GO:0005739 [list] [network] mitochondrion	(887 genes)	IEA
GO:0005829 [list] [network] cytosol	(1543 genes)	IEA

GO MF

GO:0140662 [list] [network] ATP-dependent protein folding chaperone	(84 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2916 genes)	IEA

Protein

XP_009135334.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 8, chlo 2

(predict for XP_009135334.1)

Subcellular
localization
TargetP

mito 7, chlo 3

(predict for XP_009135334.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 103859538	bra-r.6 for 103857477	bra-r.6 for 103860022	bna-r.1 for 125580922	bna-r.1 for 125607041	bna-r.1 for 106367470	ath-u.5 for HSP60-2	ath-u.5 for HSP60-3A	ath-u.5 for HSP60	ghi-r.1 for 107924713	ghi-r.1 for 107944216	ghi-r.1 for 107906100	cit-r.1 for 102627200	cit-r.1 for 102620413	gma-u.5 for 100787285	gma-u.5 for 100788248	gma-u.5 for 100818544	vvi-u.5 for 100244356	vvi-u.5 for 100266920	ppo-u.5 for 7471193	ppo-u.5 for 18097124	ppo-u.5 for 18096818	mtr-u.5 for 11417778	mtr-u.5 for 11417779	mtr-u.5 for 11421237	sly-u.5 for 101265626	sly-u.5 for 101263320	sly-u.5 for 101250927	sot-r.1 for 102582102	sot-r.1 for 102586554	sot-r.1 for 102590709	nta-r.1 for 107794731	nta-r.1 for 107770118	nta-r.1 for 107767906	osa-u.5 for 4348824	osa-u.5 for 4339466	osa-u.5 for 4331590	zma-u.5 for 100272259	zma-u.5 for 542707	zma-u.5 for 542736	tae-r.2 for 123182817	tae-r.2 for 123065123	tae-r.2 for 123088118	hvu-r.1 for 123430302	hvu-r.1 for 123448213	hvu-r.1 for 123449681	sbi-r.1 for 8059266	sbi-r.1 for 8061075	bdi-r.1 for 100833521	bdi-r.1 for 100825736	bdi-r.1 for 100825912	cre-r.1 for CHLRE_06g309100v5

Ortholog

Ortholog ID: 1456

Species

bra

bna

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

HSP60-2

HSP60

Function^*

chaperonin CPN60-like 2, mitochondrial

chaperonin CPN60, mitochondrial

chaperonin CPN60, mitochondrial-like

chaperonin CPN60, mitochondrial

heat shock protein 60-2

heat shock protein 60-3A

heat shock protein 60

chaperonin CPN60-2, mitochondrial

chaperonin CPN60-like 2, mitochondrial

chaperonin CPN60-2, mitochondrial

chaperonin CPN60-like 2, mitochondrial

chaperonin CPN60-2, mitochondrial

chaperonin CPN60

chaperonin CPN60-like 2, mitochondrial

chaperonin CPN60-2, mitochondrial

chaperonin CPN60-like 2, mitochondrial

chaperonin CPN60-2, mitochondrial

chaperonin CPN60-like 2, mitochondrial

chaperonin CPN60-2, mitochondrial

chaperonin CPN60-like 2, mitochondrial

chaperonin CPN60-2, mitochondrial

chaperonin CPN60-like 2, mitochondrial

chaperonin CPN60-1, mitochondrial

chaperonin CPN60-like 2, mitochondrial

chaperonin CPN60-1, mitochondrial

Chaperonin CPN60-like 2 mitochondrial

mitochondrial chaperonin 60

mitochondrial chaperonin-60

chaperonin CPN60-like 2, mitochondrial

chaperonin CPN60-1, mitochondrial

chaperonin CPN60-like 2, mitochondrial

chaperonin CPN60-1, mitochondrial-like

chaperonin CPN60-1, mitochondrial

chaperonin CPN60-like 2, mitochondrial

chaperonin CPN60-1, mitochondrial

chaperonin CPN60-like 2, mitochondrial

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	7
bra00970	Aminoacyl-tRNA biosynthesis	2
bra01230	Biosynthesis of amino acids	2
bra03018	RNA degradation	2
bra01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00250	Alanine, aspartate and glutamate metabolism	3
bra01240	Biosynthesis of cofactors	3
bra04626	Plant-pathogen interaction	3
bra00230	Purine metabolism	2
bra01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	3
bra04141	Protein processing in endoplasmic reticulum	3
bra04626	Plant-pathogen interaction	2
bra03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	10
bna04141	Protein processing in endoplasmic reticulum	3
bna04626	Plant-pathogen interaction	3
bna03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	8
bna04141	Protein processing in endoplasmic reticulum	3
bna04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	4
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	6
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	10
ath04626	Plant-pathogen interaction	4
ath03040	Spliceosome	4
ath04144	Endocytosis	4
ath03018	RNA degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	4
ghi04141	Protein processing in endoplasmic reticulum	2
ghi04626	Plant-pathogen interaction	2
ghi03020	RNA polymerase	2
ghi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	3
ghi00564	Glycerophospholipid metabolism	2
ghi00240	Pyrimidine metabolism	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	3
ghi00564	Glycerophospholipid metabolism	2
ghi00240	Pyrimidine metabolism	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03018	RNA degradation	2
cit03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03018	RNA degradation	5
cit04141	Protein processing in endoplasmic reticulum	4
cit01210	2-Oxocarboxylic acid metabolism	2
cit01230	Biosynthesis of amino acids	2
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	4
gma03008	Ribosome biogenesis in eukaryotes	2
gma04626	Plant-pathogen interaction	2
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	4
gma04626	Plant-pathogen interaction	4
gma03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03018	RNA degradation	5
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	3
vvi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	4
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03018	RNA degradation	4
ppo04141	Protein processing in endoplasmic reticulum	2
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	5
mtr03018	RNA degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03018	RNA degradation	5
mtr04141	Protein processing in endoplasmic reticulum	2
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03018	RNA degradation	5
mtr03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	4
sly03020	RNA polymerase	3
sly03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03018	RNA degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03018	RNA degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	2
sot03040	Spliceosome	2
sot03008	Ribosome biogenesis in eukaryotes	2
sot03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	2
sot03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03018	RNA degradation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03018	RNA degradation	5
osa03030	DNA replication	2
osa03420	Nucleotide excision repair	2
osa03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03018	RNA degradation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03018	RNA degradation	5
zma04626	Plant-pathogen interaction	3
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03018	RNA degradation	7
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03018	RNA degradation	7
zma04626	Plant-pathogen interaction	3
zma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	9
tae04141	Protein processing in endoplasmic reticulum	2
tae04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	9
tae04141	Protein processing in endoplasmic reticulum	3
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	12
tae04141	Protein processing in endoplasmic reticulum	2
tae04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	5
hvu03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03018	RNA degradation	3
hvu03040	Spliceosome	2
hvu04141	Protein processing in endoplasmic reticulum	2
hvu00300	Lysine biosynthesis	2
hvu01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	4
hvu00010	Glycolysis / Gluconeogenesis	3
hvu00710	Carbon fixation by Calvin cycle	3
hvu01230	Biosynthesis of amino acids	3
hvu03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03018	RNA degradation	2
sbi04141	Protein processing in endoplasmic reticulum	2
sbi04626	Plant-pathogen interaction	2
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	8
sbi04626	Plant-pathogen interaction	4
sbi04145	Phagosome	3
sbi04148	Efferocytosis	2
sbi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	3
bdi03018	RNA degradation	3
bdi03008	Ribosome biogenesis in eukaryotes	2
bdi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03018	RNA degradation	4
bdi04626	Plant-pathogen interaction	2
bdi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	6
bdi03018	RNA degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04141	Protein processing in endoplasmic reticulum	5
cre03018	RNA degradation	2

Expression

Expression pattern

Entrez Gene ID^*

103859538

103857477

103860022

106388026

106415390

817883

820599

821983

107944216

107906100

107958389

102627200

102620413

100787285

100788248

100820546

100244356

100266920

7471193

18096818

7482777

11417778

11417779

11421237

101265626

101263320

101250927

102582102

102586554

102590709

107794731

107770118

107767906

4348824

4339466

4331590

100272259

542707

542736

123065123

123142717

123119731

123430302

123448213

123449681

8059266

8061075

100833521

100825736

100825912

5716829

The preparation time of this page was 0.2 [sec].


Species	bra	bna	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	3	3	3	2	3	2	3	3	3	3	3	3	3	3	3	2	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103859538 (bra-r.6 coexpression data)

Top 50 enrichment test to 103859538 (bra-r.6 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**