ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bra-r.6	103859573	protein ALP1-like
bna-r.1	106380813	protein ALP1-like
bna-r.1	106424613	protein ALP1-like
bna-r.1	106383757	protein ALP1-like
ath-u.5	AT5G12010	nuclease
ghi-r.1	107933264	protein ALP1-like
ghi-r.1	107958860	protein ALP1-like
ghi-r.1	107953895	protein ALP1-like
cit-r.1	102622258	protein ALP1-like
cit-r.1	102627220	protein ALP1-like
gma-u.5	100809836	protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1
gma-u.5	100804277	protein ALP1-like
gma-u.5	100804219	protein ALP1-like
vvi-u.5	100262760	protein ALP1-like
vvi-u.5	100247440	protein ALP1-like
ppo-u.5	18107720	protein ALP1-like
ppo-u.5	18107592	protein ALP1-like
ppo-u.5	7462244	protein ALP1-like
mtr-u.5	112418710	protein ALP1-like
mtr-u.5	112421114	protein ALP1-like
mtr-u.5	112418981	protein ALP1-like
sly-u.5	101251309	protein ALP1-like
sly-u.5	101246112	protein ALP1-like
sly-u.5	SRG2	salt responsive protein 2
sot-r.1	102590956	uncharacterized LOC102590956
sot-r.1	102599607	uncharacterized LOC102599607
sot-r.1	102592929	uncharacterized LOC102592929
nta-r.1	107827483	protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1
nta-r.1	107832331	protein ALP1-like
osa-u.5	4324200	protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1
osa-u.5	4325662	protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1
osa-u.5	4339799	protein ALP1-like
zma-u.5	100280483	uncharacterized LOC100280483
zma-u.5	100275559	PIF/Ping-Pong transposase family protein
zma-u.5	100191551	PIF/Ping-Pong transposase family protein
tae-r.2	123069996	protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1
tae-r.2	123070924	protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1
tae-r.2	123078456	protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1
hvu-r.1	123443764	protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like
hvu-r.1	123452688	protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like
sbi-r.1	8065320	protein ALP1-like
sbi-r.1	8084365	protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1
sbi-r.1	8078215	protein ALP1-like
bdi-r.1	100846495	protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1
bdi-r.1	100823161	protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1

Top 50 coexpressed genes to 103859573 (bra-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103859573 (bra-r.6 coexpression data)

CoexMap"103859573"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_009135381.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 2, nucl_plas 2, chlo 1, mito 1, chlo_mito 1

(predict for XP_009135381.1)

Subcellular
localization
TargetP

other 8

(predict for XP_009135381.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 103859573	bna-r.1 for 106380813	bna-r.1 for 106424613	bna-r.1 for 106383757	ath-u.5 for AT5G12010	ghi-r.1 for 107933264	ghi-r.1 for 107958860	ghi-r.1 for 107953895	cit-r.1 for 102622258	cit-r.1 for 102627220	gma-u.5 for 100809836	gma-u.5 for 100804277	gma-u.5 for 100804219	vvi-u.5 for 100262760	vvi-u.5 for 100247440	ppo-u.5 for 18107720	ppo-u.5 for 18107592	ppo-u.5 for 7462244	mtr-u.5 for 112418710	mtr-u.5 for 112421114	mtr-u.5 for 112418981	sly-u.5 for 101251309	sly-u.5 for 101246112	sly-u.5 for SRG2	sot-r.1 for 102590956	sot-r.1 for 102599607	sot-r.1 for 102592929	nta-r.1 for 107827483	nta-r.1 for 107832331	osa-u.5 for 4324200	osa-u.5 for 4325662	osa-u.5 for 4339799	zma-u.5 for 100280483	zma-u.5 for 100275559	zma-u.5 for 100191551	tae-r.2 for 123069996	tae-r.2 for 123070924	tae-r.2 for 123078456	hvu-r.1 for 123443764	hvu-r.1 for 123452688	sbi-r.1 for 8065320	sbi-r.1 for 8084365	sbi-r.1 for 8078215	bdi-r.1 for 100846495	bdi-r.1 for 100823161

Ortholog

Ortholog ID: 2501

Species

bra

bna

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

SRG2

Function^*

protein ALP1-like

nuclease

protein ALP1-like