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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103859968   pentatricopeptide repeat-containing protein At3g22670, mitochondrial 
 bna-r.1   106423580   pentatricopeptide repeat-containing protein At3g22670, mitochondrial 
 bna-r.1   106439623   pentatricopeptide repeat-containing protein At3g22670, mitochondrial-like 
 ghi-r.1   107886131   pentatricopeptide repeat-containing protein At3g22670, mitochondrial 
 ghi-r.1   107949833   pentatricopeptide repeat-containing protein At3g22670, mitochondrial 
 cit-r.1   102619666   pentatricopeptide repeat-containing protein At3g22670, mitochondrial 
 gma-u.5   100808343   pentatricopeptide repeat-containing protein At3g22670, mitochondrial 
 gma-u.5   100806111   pentatricopeptide repeat-containing protein At3g22670, mitochondrial 
 vvi-u.5   100249363   pentatricopeptide repeat-containing protein At3g22670, mitochondrial 
 mtr-u.5   11441095   pentatricopeptide repeat-containing protein At3g22670, mitochondrial 
 sly-u.5   101251032   pentatricopeptide repeat-containing protein At3g22670, mitochondrial 
 sot-r.1   102597364   pentatricopeptide repeat-containing protein At3g22670, mitochondrial 
 nta-r.1   107806736   pentatricopeptide repeat-containing protein At3g22670, mitochondrial 
 nta-r.1   107759762   uncharacterized LOC107759762 
 osa-u.5   4334088   pentatricopeptide repeat-containing protein At3g22670, mitochondrial 
 zma-u.5   100502439   Pentatricopeptide repeat-containing protein mitochondrial 
 hvu-r.1   123398326   pentatricopeptide repeat-containing protein At3g22670, mitochondrial-like 
 sbi-r.1   8060480   pentatricopeptide repeat-containing protein At3g22670, mitochondrial 
 bdi-r.1   100828837   pentatricopeptide repeat-containing protein At3g22670, mitochondrial 

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Top 50 coexpressed genes to 103859968 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103859968 (bra-r.6 coexpression data)

CoexMap"103859968"


braLOC103859968 | Entrez gene ID : 103859968    
Species bra bna ghi cit gma vvi mtr sly sot nta osa zma hvu sbi bdi cre ppo tae ath
Paralog 1 2 2 1 2 1 1 1 1 2 1 1 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_009135821.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 4  (predict for XP_009135821.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_009135821.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103859968
bna-r.1
for
106423580
bna-r.1
for
106439623
ghi-r.1
for
107886131
ghi-r.1
for
107949833
cit-r.1
for
102619666
gma-u.5
for
100808343
gma-u.5
for
100806111
vvi-u.5
for
100249363
mtr-u.5
for
11441095
sly-u.5
for
101251032
sot-r.1
for
102597364
nta-r.1
for
107806736
nta-r.1
for
107759762
osa-u.5
for
4334088
zma-u.5
for
100502439
hvu-r.1
for
123398326
sbi-r.1
for
8060480
bdi-r.1
for
100828837


Ortholog ID: 8958
Species bra bna bna ghi ghi cit gma gma vvi mtr sly sot nta nta osa zma hvu sbi bdi
Symbol LOC103859968 LOC106423580 LOC106439623 LOC107886131 LOC107949833 LOC102619666 LOC100808343 LOC100806111 LOC100249363 LOC11441095 LOC101251032 LOC102597364 LOC107806736 LOC107759762 LOC4334088 LOC100502439 LOC123398326 LOC8060480 LOC100828837
Function* pentatricopeptide repeat-containing protein At3g22670, mitochondrial pentatricopeptide repeat-containing protein At3g22670, mitochondrial pentatricopeptide repeat-containing protein At3g22670, mitochondrial-like pentatricopeptide repeat-containing protein At3g22670, mitochondrial pentatricopeptide repeat-containing protein At3g22670, mitochondrial pentatricopeptide repeat-containing protein At3g22670, mitochondrial pentatricopeptide repeat-containing protein At3g22670, mitochondrial pentatricopeptide repeat-containing protein At3g22670, mitochondrial pentatricopeptide repeat-containing protein At3g22670, mitochondrial pentatricopeptide repeat-containing protein At3g22670, mitochondrial pentatricopeptide repeat-containing protein At3g22670, mitochondrial pentatricopeptide repeat-containing protein At3g22670, mitochondrial pentatricopeptide repeat-containing protein At3g22670, mitochondrial uncharacterized LOC107759762 pentatricopeptide repeat-containing protein At3g22670, mitochondrial Pentatricopeptide repeat-containing protein mitochondrial pentatricopeptide repeat-containing protein At3g22670, mitochondrial-like pentatricopeptide repeat-containing protein At3g22670, mitochondrial pentatricopeptide repeat-containing protein At3g22670, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00260 Glycine, serine and threonine metabolism 2
zma00261 Monobactam biosynthesis 2
zma00270 Cysteine and methionine metabolism 2
zma00300 Lysine biosynthesis 2
zma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103859968 106423580 106439623 107886131 107949833 102619666 100808343 100806111 100249363 11441095 101251032 102597364 107806736 107759762 4334088 100502439 123398326 8060480 100828837
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