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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103860328   nuclear pore complex protein NUP133 
 bna-r.1   106426761   nuclear pore complex protein NUP133 
 bna-r.1   106439793   nuclear pore complex protein NUP133-like 
 ath-u.5   AT2G05120   Nucleoporin, Nup133/Nup155-like protein 
 ghi-r.1   107954946   nuclear pore complex protein NUP133 
 ghi-r.1   121231814   nuclear pore complex protein NUP133 
 cit-r.1   102609623   nuclear pore complex protein NUP133 
 gma-u.5   100793167   nuclear pore complex protein NUP133 
 gma-u.5   100780148   nuclear pore complex protein NUP133 
 vvi-u.5   100249432   nuclear pore complex protein NUP133 
 ppo-u.5   7489857   nuclear pore complex protein NUP133 
 mtr-u.5   11434873   nuclear pore complex protein NUP133 
 sly-u.5   101253396   nuclear pore complex protein NUP133 
 sot-r.1   102594412   nuclear pore complex protein NUP133 
 nta-r.1   107790000   nuclear pore complex protein NUP133 
 nta-r.1   107778265   nuclear pore complex protein NUP133 
 osa-u.5   4332118   nuclear pore complex protein NUP133 
 zma-u.5   100384809   uncharacterized LOC100384809 
 tae-r.2   123098184   nuclear pore complex protein NUP133 
 tae-r.2   123092906   nuclear pore complex protein NUP133 
 tae-r.2   123085115   nuclear pore complex protein NUP133 
 hvu-r.1   123449261   nuclear pore complex protein NUP133 
 sbi-r.1   8085268   nuclear pore complex protein NUP133 
 bdi-r.1   100845532   nuclear pore complex protein NUP133 

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Top 50 coexpressed genes to 103860328 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103860328 (bra-r.6 coexpression data)

CoexMap"103860328"


braLOC103860328 | Entrez gene ID : 103860328    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 2 1 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp03013 [list] [network] Nucleocytoplasmic transport (160 genes)
GO BP
GO:0000972 [list] [network] transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery  (13 genes)  IEA  
GO:0016973 [list] [network] poly(A)+ mRNA export from nucleus  (15 genes)  IEA  
GO:0006606 [list] [network] protein import into nucleus  (69 genes)  IEA  
GO CC
GO:0031080 [list] [network] nuclear pore outer ring  (11 genes)  IEA  
GO MF
GO:0017056 [list] [network] structural constituent of nuclear pore  (25 genes)  IEA  
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_009136162.1 [sequence] [blastp]
XP_009136163.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 1,  nucl 1,  cyto_mito 1  (predict for XP_009136162.1)
chlo 6,  mito 1,  nucl 1,  cyto_mito 1  (predict for XP_009136163.1)
Subcellular
localization
TargetP
chlo 6,  mito 4  (predict for XP_009136162.1)
chlo 6,  mito 4  (predict for XP_009136163.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103860328
bna-r.1
for
106426761
bna-r.1
for
106439793
ath-u.5
for
AT2G05120
ghi-r.1
for
107954946
ghi-r.1
for
121231814
cit-r.1
for
102609623
gma-u.5
for
100793167
gma-u.5
for
100780148
vvi-u.5
for
100249432
ppo-u.5
for
7489857
mtr-u.5
for
11434873
sly-u.5
for
101253396
sot-r.1
for
102594412
nta-r.1
for
107790000
nta-r.1
for
107778265
osa-u.5
for
4332118
zma-u.5
for
100384809
tae-r.2
for
123098184
tae-r.2
for
123092906
tae-r.2
for
123085115
hvu-r.1
for
123449261
sbi-r.1
for
8085268
bdi-r.1
for
100845532


Ortholog ID: 10647
Species bra bna bna ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC103860328 LOC106426761 LOC106439793 AT2G05120 LOC107954946 LOC121231814 LOC102609623 LOC100793167 LOC100780148 LOC100249432 LOC7489857 LOC11434873 LOC101253396 LOC102594412 LOC107790000 LOC107778265 LOC4332118 LOC100384809 LOC123098184 LOC123092906 LOC123085115 LOC123449261 LOC8085268 LOC100845532
Function* nuclear pore complex protein NUP133 nuclear pore complex protein NUP133 nuclear pore complex protein NUP133-like Nucleoporin, Nup133/Nup155-like protein nuclear pore complex protein NUP133 nuclear pore complex protein NUP133 nuclear pore complex protein NUP133 nuclear pore complex protein NUP133 nuclear pore complex protein NUP133 nuclear pore complex protein NUP133 nuclear pore complex protein NUP133 nuclear pore complex protein NUP133 nuclear pore complex protein NUP133 nuclear pore complex protein NUP133 nuclear pore complex protein NUP133 nuclear pore complex protein NUP133 nuclear pore complex protein NUP133 uncharacterized LOC100384809 nuclear pore complex protein NUP133 nuclear pore complex protein NUP133 nuclear pore complex protein NUP133 nuclear pore complex protein NUP133 nuclear pore complex protein NUP133 nuclear pore complex protein NUP133
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 5
ath03008 Ribosome biogenesis in eukaryotes 2
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03450 Non-homologous end-joining 3
ghi03440 Homologous recombination 2
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03450 Non-homologous end-joining 3
ghi03440 Homologous recombination 2
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 4
cit03018 RNA degradation 2
cit03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 6
vvi03020 RNA polymerase 2
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 3
mtr03020 RNA polymerase 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 5
sly03015 mRNA surveillance pathway 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 9
tae03008 Ribosome biogenesis in eukaryotes 3
tae03410 Base excision repair 3
tae03440 Homologous recombination 2
tae03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 13
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
sbi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103860328 106426761 106439793 815060 107954946 121231814 102609623 100793167 100780148 100249432 7489857 11434873 101253396 102594412 107790000 107778265 4332118 100384809 123098184 123092906 123085115 123449261 8085268 100845532
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