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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103860338   pentatricopeptide repeat-containing protein At4g22760 
 bna-r.1   106375735   pentatricopeptide repeat-containing protein At4g22760 
 ath-u.5   AT4G22760   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ghi-r.1   107926923   pentatricopeptide repeat-containing protein At4g22760 
 ghi-r.1   107941639   pentatricopeptide repeat-containing protein At4g22760 
 vvi-u.5   100855020   pentatricopeptide repeat-containing protein At4g22760 
 ppo-u.5   7479231   pentatricopeptide repeat-containing protein At4g22760 
 mtr-u.5   11422867   pentatricopeptide repeat-containing protein At4g22760 
 sly-u.5   101248241   pentatricopeptide repeat-containing protein At4g22760 
 sot-r.1   102587025   pentatricopeptide repeat-containing protein At4g22760 
 nta-r.1   107766170   pentatricopeptide repeat-containing protein At4g22760-like 
 nta-r.1   107810366   pentatricopeptide repeat-containing protein At4g22760 
 osa-u.5   4344729   pentatricopeptide repeat-containing protein At4g22760 
 zma-u.5   100279548   Pentatricopeptide repeat-containing protein 
 sbi-r.1   8062910   pentatricopeptide repeat-containing protein At4g22760 

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Top 50 coexpressed genes to 103860338 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103860338 (bra-r.6 coexpression data)

CoexMap"103860338"


braLOC103860338 | Entrez gene ID : 103860338    
Species bra bna ath ghi vvi ppo mtr sly sot nta osa zma sbi bdi tae cre hvu gma cit
Paralog 1 1 1 2 1 1 1 1 1 2 1 1 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (422 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1857 genes)  IEA  
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_009136179.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 2,  cyto_mito 1,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_009136179.2)
Subcellular
localization
TargetP
chlo 5,  mito 3  (predict for XP_009136179.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103860338
bna-r.1
for
106375735
ath-u.5
for
AT4G22760
ghi-r.1
for
107926923
ghi-r.1
for
107941639
vvi-u.5
for
100855020
ppo-u.5
for
7479231
mtr-u.5
for
11422867
sly-u.5
for
101248241
sot-r.1
for
102587025
nta-r.1
for
107766170
nta-r.1
for
107810366
osa-u.5
for
4344729
zma-u.5
for
100279548
sbi-r.1
for
8062910


Ortholog ID: 11989
Species bra bna ath ghi ghi vvi ppo mtr sly sot nta nta osa zma sbi
Symbol LOC103860338 LOC106375735 AT4G22760 LOC107926923 LOC107941639 LOC100855020 LOC7479231 LOC11422867 LOC101248241 LOC102587025 LOC107766170 LOC107810366 LOC4344729 LOC100279548 LOC8062910
Function* pentatricopeptide repeat-containing protein At4g22760 pentatricopeptide repeat-containing protein At4g22760 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g22760 pentatricopeptide repeat-containing protein At4g22760 pentatricopeptide repeat-containing protein At4g22760 pentatricopeptide repeat-containing protein At4g22760 pentatricopeptide repeat-containing protein At4g22760 pentatricopeptide repeat-containing protein At4g22760 pentatricopeptide repeat-containing protein At4g22760 pentatricopeptide repeat-containing protein At4g22760-like pentatricopeptide repeat-containing protein At4g22760 pentatricopeptide repeat-containing protein At4g22760 Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g22760
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 5
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta03040 Spliceosome 3
nta00230 Purine metabolism 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103860338 106375735 828375 107926923 107941639 100855020 7479231 11422867 101248241 102587025 107766170 107810366 4344729 100279548 8062910
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