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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103863064   cystathionine beta-lyase, chloroplastic 
 bra-r.6   103841611   cystathionine beta-lyase, chloroplastic 
 bna-r.1   106368024   cystathionine beta-lyase, chloroplastic 
 bna-r.1   106399301   cystathionine beta-lyase, chloroplastic 
 bna-r.1   106411702   cystathionine beta-lyase, chloroplastic 
 ath-u.5   CBL   cystathionine beta-lyase 
 ghi-r.1   107942593   cystathionine beta-lyase, chloroplastic 
 ghi-r.1   107925701   cystathionine beta-lyase, chloroplastic 
 cit-r.1   102608399   cystathionine beta-lyase, chloroplastic 
 gma-u.5   100812354   cystathionine beta-lyase, chloroplastic 
 gma-u.5   100786470   cystathionine beta-lyase, chloroplastic-like 
 vvi-u.5   100260731   cystathionine beta-lyase, chloroplastic 
 ppo-u.5   18106110   cystathionine beta-lyase, chloroplastic 
 mtr-u.5   25483994   cystathionine beta-lyase, chloroplastic 
 sly-u.5   101265082   cystathionine beta-lyase, chloroplastic 
 sot-r.1   CBL   cystathionine beta-lyase 
 nta-r.1   107786229   cystathionine beta-lyase, chloroplastic-like 
 nta-r.1   107781475   cystathionine beta-lyase, chloroplastic-like 
 osa-u.5   4340283   cystathionine beta-lyase, chloroplastic 
 osa-u.5   107275791   cystathionine beta-lyase, chloroplastic 
 zma-u.5   100281708   Cystathionine beta-lyase chloroplastic 
 tae-r.2   123150324   cystathionine beta-lyase, chloroplastic 
 tae-r.2   123160296   cystathionine beta-lyase, chloroplastic 
 tae-r.2   123166424   cystathionine beta-lyase, chloroplastic 
 hvu-r.1   123409968   cystathionine beta-lyase, chloroplastic 
 sbi-r.1   8064048   cystathionine beta-lyase, chloroplastic 
 bdi-r.1   100836410   cystathionine beta-lyase, chloroplastic 
 cre-r.1   CHLRE_16g669550v5   uncharacterized protein 

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Top 50 coexpressed genes to 103863064 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103863064 (bra-r.6 coexpression data)

CoexMap"103863064"


braLOC103863064 | Entrez gene ID : 103863064    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 3 1 2 1 2 1 1 1 1 1 2 2 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp00270 [list] [network] Cysteine and methionine metabolism (193 genes)
brp00450 [list] [network] Selenocompound metabolism (27 genes)
brp01230 [list] [network] Biosynthesis of amino acids (370 genes)
GO BP
GO:0071266 [list] [network] 'de novo' L-methionine biosynthetic process  (2 genes)  IEA  
GO:0019346 [list] [network] transsulfuration  (9 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (7940 genes)  IEA  
GO MF
GO:0030170 [list] [network] pyridoxal phosphate binding  (147 genes)  IEA  
Protein XP_009139048.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_009139048.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_009139048.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103863064
bra-r.6
for
103841611
bna-r.1
for
106368024
bna-r.1
for
106399301
bna-r.1
for
106411702
ath-u.5
for
CBL
ghi-r.1
for
107942593
ghi-r.1
for
107925701
cit-r.1
for
102608399
gma-u.5
for
100812354
gma-u.5
for
100786470
vvi-u.5
for
100260731
ppo-u.5
for
18106110
mtr-u.5
for
25483994
sly-u.5
for
101265082
sot-r.1
for
CBL
nta-r.1
for
107786229
nta-r.1
for
107781475
osa-u.5
for
4340283
osa-u.5
for
107275791
zma-u.5
for
100281708
tae-r.2
for
123150324
tae-r.2
for
123160296
tae-r.2
for
123166424
hvu-r.1
for
123409968
sbi-r.1
for
8064048
bdi-r.1
for
100836410
cre-r.1
for
CHLRE_16g669550v5


Ortholog ID: 7257
Species bra bra bna bna bna ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa osa zma tae tae tae hvu sbi bdi cre
Symbol LOC103863064 LOC103841611 LOC106368024 LOC106399301 LOC106445215 CBL LOC107942593 LOC107925701 LOC102608399 LOC100812354 LOC100786470 LOC100260731 LOC18106110 LOC25483994 LOC101265082 CBL LOC107781475 LOC107784322 LOC4340283 LOC107275791 LOC100281708 LOC123150324 LOC123160296 LOC123166424 LOC123409968 LOC8064048 LOC100836410 CHLRE_16g669550v5
Function* cystathionine beta-lyase, chloroplastic cystathionine beta-lyase, chloroplastic cystathionine beta-lyase, chloroplastic cystathionine beta-lyase, chloroplastic cystathionine beta-lyase, chloroplastic cystathionine beta-lyase cystathionine beta-lyase, chloroplastic cystathionine beta-lyase, chloroplastic cystathionine beta-lyase, chloroplastic cystathionine beta-lyase, chloroplastic cystathionine beta-lyase, chloroplastic-like cystathionine beta-lyase, chloroplastic cystathionine beta-lyase, chloroplastic cystathionine beta-lyase, chloroplastic cystathionine beta-lyase, chloroplastic cystathionine beta-lyase cystathionine beta-lyase, chloroplastic-like cystathionine beta-lyase, chloroplastic cystathionine beta-lyase, chloroplastic cystathionine beta-lyase, chloroplastic Cystathionine beta-lyase chloroplastic cystathionine beta-lyase, chloroplastic cystathionine beta-lyase, chloroplastic cystathionine beta-lyase, chloroplastic cystathionine beta-lyase, chloroplastic cystathionine beta-lyase, chloroplastic cystathionine beta-lyase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00920 Sulfur metabolism 5
bra01230 Biosynthesis of amino acids 5
bra00270 Cysteine and methionine metabolism 4
bra00966 Glucosinolate biosynthesis 4
bra01320 Sulfur cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
bra04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 4
bna00450 Selenocompound metabolism 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 4
bna00450 Selenocompound metabolism 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 4
bna00450 Selenocompound metabolism 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00966 Glucosinolate biosynthesis 9
ath01210 2-Oxocarboxylic acid metabolism 9
ath01230 Biosynthesis of amino acids 7
ath00270 Cysteine and methionine metabolism 6
ath00290 Valine, leucine and isoleucine biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 4
ghi00270 Cysteine and methionine metabolism 2
ghi00450 Selenocompound metabolism 2
ghi00340 Histidine metabolism 2
ghi00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 4
ghi00270 Cysteine and methionine metabolism 2
ghi00450 Selenocompound metabolism 2
ghi00340 Histidine metabolism 2
ghi00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 6
gma01200 Carbon metabolism 4
gma00270 Cysteine and methionine metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 3
gma00920 Sulfur metabolism 3
gma01320 Sulfur cycle 3
gma00670 One carbon pool by folate 3
gma04981 Folate transport and metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 3
vvi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 4
sly00270 Cysteine and methionine metabolism 3
sly00460 Cyanoamino acid metabolism 2
sly00999 Biosynthesis of various plant secondary metabolites 2
sly00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 8
sot00020 Citrate cycle (TCA cycle) 7
sot01210 2-Oxocarboxylic acid metabolism 6
sot00010 Glycolysis / Gluconeogenesis 4
sot00620 Pyruvate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
nta00450 Selenocompound metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
nta00450 Selenocompound metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 9
osa01230 Biosynthesis of amino acids 3
osa00270 Cysteine and methionine metabolism 2
osa00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 3
osa03050 Proteasome 3
osa00270 Cysteine and methionine metabolism 2
osa00450 Selenocompound metabolism 2
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 6
zma01200 Carbon metabolism 5
zma00900 Terpenoid backbone biosynthesis 4
zma00010 Glycolysis / Gluconeogenesis 4
zma00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00920 Sulfur metabolism 7
tae01320 Sulfur cycle 7
tae00230 Purine metabolism 6
tae00450 Selenocompound metabolism 6
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00920 Sulfur metabolism 10
tae01320 Sulfur cycle 10
tae00230 Purine metabolism 6
tae00450 Selenocompound metabolism 6
tae00261 Monobactam biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00920 Sulfur metabolism 7
tae01320 Sulfur cycle 7
tae00230 Purine metabolism 6
tae00450 Selenocompound metabolism 6
tae00261 Monobactam biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
sbi04120 Ubiquitin mediated proteolysis 5
sbi01230 Biosynthesis of amino acids 2
sbi00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00270 Cysteine and methionine metabolism 3
bdi00450 Selenocompound metabolism 2
bdi00920 Sulfur metabolism 2
bdi01230 Biosynthesis of amino acids 2
bdi00670 One carbon pool by folate 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103863064 103841611 106368024 106399301 106445215 824872 107942593 107925701 102608399 100812354 100786470 100260731 18106110 25483994 101265082 102577774 107781475 107784322 4340283 107275791 100281708 123150324 123160296 123166424 123409968 8064048 100836410 5724725
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