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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   ARF8-2   auxin response factor 8 
 bra-r.6   ARF8-1   auxin response factor 8 
 bna-r.1   106445029   auxin response factor 8 
 bna-r.1   106435561   auxin response factor 8 
 bna-r.1   106426279   auxin response factor 8-like 
 ath-u.5   ARF8   auxin response factor 8 
 ghi-r.1   107935696   auxin response factor 8 
 ghi-r.1   107954826   auxin response factor 8 
 ghi-r.1   121210864   auxin response factor 8 
 cit-r.1   102631382   auxin response factor 8 
 gma-u.5   100814479   auxin response factor 8 
 gma-u.5   ARF8B   auxin response factor 8b 
 gma-u.5   100784373   auxin response factor 8 
 vvi-u.5   100258129   auxin response factor 8 
 ppo-u.5   18106532   auxin response factor 8 
 ppo-u.5   7487430   auxin response factor 8 
 mtr-u.5   11432564   auxin response factor 8 
 mtr-u.5   11413758   auxin response factor 8 
 sly-u.5   ARF8a   auxin response factor 8a 
 sly-u.5   ARF8b   auxin response factor 8b 
 sot-r.1   102597704   auxin response factor 8-like 
 sot-r.1   102598513   auxin response factor 8-like 
 sot-r.1   102597963   auxin response factor 8-like 
 nta-r.1   107829853   auxin response factor 8-like 
 nta-r.1   107814545   auxin response factor 8 
 nta-r.1   107812758   auxin response factor 8 
 osa-u.5   4337363   auxin response factor 12-like 
 zma-u.5   100384328   uncharacterized LOC100384328 
 zma-u.5   100382863   uncharacterized LOC100382863 
 tae-r.2   123190975   auxin response factor 12 
 tae-r.2   123055124   auxin response factor 12 
 tae-r.2   123047319   auxin response factor 12 
 hvu-r.1   123428407   auxin response factor 12 
 sbi-r.1   8082594   auxin response factor 12 
 bdi-r.1   100842100   auxin response factor 12 

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Top 50 coexpressed genes to ARF8-2 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ARF8-2 (bra-r.6 coexpression data)

CoexMap"103863707"


braARF8-2 | Entrez gene ID : 103863707    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 3 1 3 1 3 1 2 2 2 3 3 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp04075 [list] [network] Plant hormone signal transduction (750 genes)
GO BP
GO:0009725 [list] [network] response to hormone  (564 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (2595 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (4801 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (3159 genes)  IEA  
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_009139708.1 [sequence] [blastp]
XP_009139709.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_009139708.1)
nucl 9  (predict for XP_009139709.1)
Subcellular
localization
TargetP
other 4,  chlo 4  (predict for XP_009139708.1)
other 4,  chlo 4  (predict for XP_009139709.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
ARF8-2
bra-r.6
for
ARF8-1
bna-r.1
for
106445029
bna-r.1
for
106435561
bna-r.1
for
106426279
ath-u.5
for
ARF8
ghi-r.1
for
107935696
ghi-r.1
for
107954826
ghi-r.1
for
121210864
cit-r.1
for
102631382
gma-u.5
for
100814479
gma-u.5
for
ARF8B
gma-u.5
for
100784373
vvi-u.5
for
100258129
ppo-u.5
for
18106532
ppo-u.5
for
7487430
mtr-u.5
for
11432564
mtr-u.5
for
11413758
sly-u.5
for
ARF8a
sly-u.5
for
ARF8b
sot-r.1
for
102597704
sot-r.1
for
102598513
sot-r.1
for
102597963
nta-r.1
for
107829853
nta-r.1
for
107814545
nta-r.1
for
107812758
osa-u.5
for
4337363
zma-u.5
for
100384328
zma-u.5
for
100382863
tae-r.2
for
123190975
tae-r.2
for
123055124
tae-r.2
for
123047319
hvu-r.1
for
123428407
sbi-r.1
for
8082594
bdi-r.1
for
100842100


Ortholog ID: 5180
Species bra bra bna bna bna ath ghi ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sly sot sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol ARF8-2 ARF8-1 LOC106445029 LOC106426279 LOC111199287 ARF8 LOC107935696 LOC107954826 LOC107952790 LOC102631382 LOC100814479 ARF8B ARF8A LOC100258129 LOC18106532 LOC7487430 LOC11432564 LOC11413758 ARF8a ARF8b LOC102597704 LOC102598513 LOC102597963 LOC107829853 LOC107814545 LOC107787782 LOC4337363 LOC100384328 LOC100382863 LOC123190975 LOC123055124 LOC123047319 LOC123428407 LOC8082594 LOC100842100
Function* auxin response factor 8 auxin response factor 8 auxin response factor 8 auxin response factor 8-like auxin response factor 8 auxin response factor 8 auxin response factor 8 auxin response factor 8 auxin response factor 8 auxin response factor 8 auxin response factor 8 auxin response factor 8b auxin response factor 8a auxin response factor 8 auxin response factor 8 auxin response factor 8 auxin response factor 8 auxin response factor 8 auxin response factor 8a auxin response factor 8b auxin response factor 8-like auxin response factor 8-like auxin response factor 8-like auxin response factor 8-like auxin response factor 8 auxin response factor 8 auxin response factor 12-like uncharacterized LOC100384328 uncharacterized LOC100382863 auxin response factor 12 auxin response factor 12 auxin response factor 12 auxin response factor 12 auxin response factor 12 auxin response factor 12
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 6
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 5
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 8
nta00330 Arginine and proline metabolism 4
nta03008 Ribosome biogenesis in eukaryotes 3
nta03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 8
nta03008 Ribosome biogenesis in eukaryotes 3
nta03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 8
nta00330 Arginine and proline metabolism 4
nta03008 Ribosome biogenesis in eukaryotes 3
nta03018 RNA degradation 3
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae00402 Benzoxazinoid biosynthesis 2
tae00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103863707 103831066 106445029 106426279 111199287 833672 107935696 107954826 107952790 102631382 100814479 100784804 100780393 100258129 18106532 7487430 11432564 11413758 100736450 100301945 102597704 102598513 102597963 107829853 107814545 107787782 4337363 100384328 100382863 123190975 123055124 123047319 123428407 8082594 100842100
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