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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103865842   squalene monooxygenase 1,1 
 bna-r.1   106366016   squalene monooxygenase 1,1 
 bna-r.1   106428446   squalene monooxygenase 1,1-like 
 ath-u.5   SQP1   FAD/NAD(P)-binding oxidoreductase family protein 
 ath-u.5   AT5G24155   FAD/NAD(P)-binding oxidoreductase family protein 
 ath-u.5   SQE6   squalene monooxygenase 6 

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Top 50 coexpressed genes to 103865842 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103865842 (bra-r.6 coexpression data)

CoexMap"103865842"


braLOC103865842 | Entrez gene ID : 103865842    
Species bra bna ath vvi bdi ppo sbi gma ghi cit hvu sot sly nta osa tae zma cre mtr
Paralog 1 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp00100 [list] [network] Steroid biosynthesis (56 genes)
brp00909 [list] [network] Sesquiterpenoid and triterpenoid biosynthesis (29 genes)
GO BP
GO:0016126 [list] [network] sterol biosynthetic process  (28 genes)  IEA  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (778 genes)  IEA  
GO:0016020 [list] [network] membrane  (4714 genes)  IEA  
GO MF
GO:0004506 [list] [network] squalene monooxygenase activity  (11 genes)  IEA  
GO:0050660 [list] [network] flavin adenine dinucleotide binding  (222 genes)  IEA  
Protein XP_009141944.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  plas 2,  nucl 1,  E.R. 1  (predict for XP_009141944.1)
Subcellular
localization
TargetP
scret 6  (predict for XP_009141944.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103865842
bna-r.1
for
106366016
bna-r.1
for
106428446
ath-u.5
for
SQP1
ath-u.5
for
AT5G24155
ath-u.5
for
SQE6


Ortholog ID: 19350
Species bra bna bna ath ath ath
Symbol LOC103865842 LOC106366016 LOC106428446 SQP1 AT5G24155 SQE6
Function* squalene monooxygenase 1,1 squalene monooxygenase 1,1 squalene monooxygenase 1,1-like FAD/NAD(P)-binding oxidoreductase family protein FAD/NAD(P)-binding oxidoreductase family protein squalene monooxygenase 6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00380 Tryptophan metabolism 3
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra01200 Carbon metabolism 3
bra04016 MAPK signaling pathway - plant 3
bra04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 6
bna00909 Sesquiterpenoid and triterpenoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 6
bna00909 Sesquiterpenoid and triterpenoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00100 Steroid biosynthesis 2
ath00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00100 Steroid biosynthesis 2
ath00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 2
ath00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
ath00100 Steroid biosynthesis 2
ath00909 Sesquiterpenoid and triterpenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103865842 106366016 106428446 832480 832481 832482
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