ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bra-r.6	103866978	serine/threonine-protein kinase ppk15
bra-r.6	103831826	uncharacterized LOC103831826
bra-r.6	103830751	uncharacterized LOC103830751
bra-r.6	103865773	serine/threonine-protein kinase ppk15
bna-r.1	106394101	serine/threonine-protein kinase ppk15-like
bna-r.1	106354284	uncharacterized LOC106354284
bna-r.1	106397611	serine/threonine-protein kinase ppk15
ath-u.5	AT2G40120	Protein kinase superfamily protein
ath-u.5	AT3G17750	Protein kinase superfamily protein
ghi-r.1	107908439	uncharacterized LOC107908439
ghi-r.1	121207882	probable serine/threonine-protein kinase dyrk2
ghi-r.1	107953321	uncharacterized LOC107953321
cit-r.1	102628658	uncharacterized LOC102628658
cit-r.1	102625951	uncharacterized LOC102625951
gma-u.5	100798608	uncharacterized LOC100798608
gma-u.5	100797095	uncharacterized LOC100797095
gma-u.5	100786225	uncharacterized LOC100786225
vvi-u.5	100265606	serine/threonine-protein kinase ppk15
vvi-u.5	100255903	uncharacterized LOC100255903
ppo-u.5	18105578	uncharacterized LOC18105578
ppo-u.5	7488023	serine/threonine-protein kinase ppk15
ppo-u.5	7454018	uncharacterized LOC7454018
mtr-u.5	25496682	uncharacterized LOC25496682
mtr-u.5	11425552	DYRK-family kinase pom1
sly-u.5	101245853	uncharacterized LOC101245853
sly-u.5	101252371	protein kinase domain-containing protein
sly-u.5	101252694	serine/threonine-protein kinase ppk15
sot-r.1	102594326	uncharacterized LOC102594326
sot-r.1	102605840	uncharacterized LOC102605840
sot-r.1	102600192	dual specificity tyrosine-phosphorylation-regulated kinase 4
nta-r.1	107799464	uncharacterized LOC107799464
nta-r.1	107803643	uncharacterized LOC107803643
nta-r.1	107818690	uncharacterized LOC107818690
osa-u.5	4339052	DYRK-family kinase pom1
osa-u.5	4333928	uncharacterized LOC4333928
osa-u.5	4327402	uncharacterized LOC4327402
zma-u.5	103625933	Protein kinase superfamily protein
zma-u.5	100501203	uncharacterized LOC100501203
zma-u.5	100381461	Protein kinase superfamily protein
tae-r.2	123079642	DYRK-family kinase pom1
tae-r.2	123062493	DYRK-family kinase pom1
tae-r.2	123071300	cyclin-dependent kinase 11.2
hvu-r.1	123444981	serine/threonine-protein kinase PRP4 homolog
hvu-r.1	123445057	dual specificity tyrosine-phosphorylation-regulated kinase mbk-1-like
hvu-r.1	123447546	uncharacterized LOC123447546
sbi-r.1	8059994	uncharacterized LOC8059994
sbi-r.1	8057751	serine/threonine-protein kinase ppk15
bdi-r.1	100839568	uncharacterized LOC100839568
bdi-r.1	100828781	dual specificity tyrosine-phosphorylation-regulated kinase mbk-1
bdi-r.1	100827656	probable serine/threonine-protein kinase yakA
cre-r.1	CHLRE_01g008550v5	uncharacterized protein
cre-r.1	CHLRE_07g337300v5	uncharacterized protein

Top 50 coexpressed genes to 103866978 (bra-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103866978 (bra-r.6 coexpression data)

CoexMap"103866978"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0018107 [list] [network] peptidyl-threonine phosphorylation	(12 genes)	IEA
GO:0018105 [list] [network] peptidyl-serine phosphorylation	(147 genes)	IEA

GO CC

GO:0005737 [list] [network] cytoplasm

(7940 genes)

IEA

GO MF

GO:0004713 [list] [network] protein tyrosine kinase activity	(49 genes)	IEA
GO:0004674 [list] [network] protein serine/threonine kinase activity	(496 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2916 genes)	IEA

Protein

XP_009143245.2 [sequence] [blastp]
XP_009143247.2 [sequence] [blastp]
XP_018514254.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 3, cyto 3, cyto_nucl 3, E.R. 1, cysk_nucl 1, cyto_pero 1	(predict for XP_009143245.2)
cyto 5, nucl 3, cyto_E.R. 3, cyto_plas 3	(predict for XP_009143247.2)
cyto 4, E.R. 2, cyto_nucl 2, cyto_pero 2	(predict for XP_018514254.2)

Subcellular
localization
TargetP

other 6	(predict for XP_009143245.2)
other 8	(predict for XP_009143247.2)
other 5, scret 3	(predict for XP_018514254.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 103866978	bra-r.6 for 103831826	bra-r.6 for 103830751	bra-r.6 for 103865773	bna-r.1 for 106394101	bna-r.1 for 106354284	bna-r.1 for 106397611	ath-u.5 for AT2G40120	ath-u.5 for AT3G17750	ghi-r.1 for 107908439	ghi-r.1 for 121207882	ghi-r.1 for 107953321	cit-r.1 for 102628658	cit-r.1 for 102625951	gma-u.5 for 100798608	gma-u.5 for 100797095	gma-u.5 for 100786225	vvi-u.5 for 100265606	vvi-u.5 for 100255903	ppo-u.5 for 18105578	ppo-u.5 for 7488023	ppo-u.5 for 7454018	mtr-u.5 for 25496682	mtr-u.5 for 11425552	sly-u.5 for 101245853	sly-u.5 for 101252371	sly-u.5 for 101252694	sot-r.1 for 102594326	sot-r.1 for 102605840	sot-r.1 for 102600192	nta-r.1 for 107799464	nta-r.1 for 107803643	nta-r.1 for 107818690	osa-u.5 for 4339052	osa-u.5 for 4333928	osa-u.5 for 4327402	zma-u.5 for 103625933	zma-u.5 for 100501203	zma-u.5 for 100381461	tae-r.2 for 123079642	tae-r.2 for 123062493	tae-r.2 for 123071300	hvu-r.1 for 123444981	hvu-r.1 for 123445057	hvu-r.1 for 123447546	sbi-r.1 for 8059994	sbi-r.1 for 8057751	bdi-r.1 for 100839568	bdi-r.1 for 100828781	bdi-r.1 for 100827656	cre-r.1 for CHLRE_01g008550v5	cre-r.1 for CHLRE_07g337300v5

Ortholog

Ortholog ID: 1416

Species

bra

bna

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

serine/threonine-protein kinase ppk15

uncharacterized LOC103831826

serine/threonine-protein kinase ppk15

uncharacterized LOC106354284

uncharacterized LOC106406000

serine/threonine-protein kinase ppk15

Protein kinase superfamily protein

probable serine/threonine-protein kinase dyrk2

uncharacterized LOC107924545

uncharacterized LOC107887130

uncharacterized LOC102628658

uncharacterized LOC102625951

uncharacterized LOC100786225

dual specificity tyrosine-phosphorylation-regulated kinase mbk-1

uncharacterized LOC100802148

serine/threonine-protein kinase ppk15

uncharacterized LOC100255903

serine/threonine-protein kinase ppk15

uncharacterized LOC7454018

serine/threonine-protein kinase ppk15

uncharacterized LOC25496682

DYRK-family kinase pom1

uncharacterized LOC101245853

protein kinase domain-containing protein

serine/threonine-protein kinase ppk15

uncharacterized LOC102594326

uncharacterized LOC102605840

dual specificity tyrosine-phosphorylation-regulated kinase 4

uncharacterized LOC107799464

uncharacterized LOC107777685

uncharacterized LOC107780763

DYRK-family kinase pom1

uncharacterized LOC4333928

uncharacterized LOC4327402

Protein kinase superfamily protein

ATP binding protein

uncharacterized LOC100279465

cyclin-dependent kinase 11.2

serine/threonine-protein kinase STE20

DYRK-family kinase pom1

serine/threonine-protein kinase PRP4 homolog

dual specificity tyrosine-phosphorylation-regulated kinase mbk-1-like

uncharacterized LOC123447546

uncharacterized LOC8059994

serine/threonine-protein kinase ppk15

uncharacterized LOC100839568

dual specificity tyrosine-phosphorylation-regulated kinase mbk-1

probable serine/threonine-protein kinase yakA

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03440	Homologous recombination	2
ghi03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00040	Pentose and glucuronate interconversions	2
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	5
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03015	mRNA surveillance pathway	2
vvi04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	2
ppo01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04148	Efferocytosis	2
mtr03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	3
sly03420	Nucleotide excision repair	2
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03083	Polycomb repressive complex	3
nta03250	Viral life cycle - HIV-1	3
nta00562	Inositol phosphate metabolism	2
nta04070	Phosphatidylinositol signaling system	2
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2
nta03018	RNA degradation	2
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03420	Nucleotide excision repair	2
nta00906	Carotenoid biosynthesis	2
nta00760	Nicotinate and nicotinamide metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00260	Glycine, serine and threonine metabolism	2
zma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	4
tae04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00310	Lysine degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	2
hvu00052	Galactose metabolism	2
hvu04626	Plant-pathogen interaction	2
hvu01240	Biosynthesis of cofactors	2
hvu00030	Pentose phosphate pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	2
sbi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2
bdi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04142	Lysosome	2
bdi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00630	Glyoxylate and dicarboxylate metabolism	2
cre01200	Carbon metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

103866978

103831826

103865773

106354284

106406000

106450260

821043

843680

121207882

107924545

107887130

102628658

102625951

100786225

100795722

100802148

100265606

100255903

7488023

7454018

7474433

25496682

11425552

101245853

101252371

101252694

102594326

102605840

102600192

107799464

107777685

107780763

4339052

4333928

4327402

100381461

100281776

100279465

123071300

123095920

123136550

123444981

123445057

123447546

8059994

8057751

100839568

100828781

100827656

5725852

5725663

The preparation time of this page was 0.2 [sec].


Species	bra	bna	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	2	3	2	3	2	3	2	3	3	3	3	3	3	3	2	3	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103866978 (bra-r.6 coexpression data)

Top 50 enrichment test to 103866978 (bra-r.6 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**