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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6  103835804  pentatricopeptide repeat-containing protein At3g20730 
 ghi-r.1  107929814  pentatricopeptide repeat-containing protein At3g20730 
 ghi-r.1  107902044  pentatricopeptide repeat-containing protein At3g20730 
 cit-r.1  102629517  pentatricopeptide repeat-containing protein At3g20730 
 ppo-u.5  7456325  pentatricopeptide repeat-containing protein At3g20730 
 sly-u.5  101243856  pentatricopeptide repeat-containing protein 
 sot-r.1  102587579  pentatricopeptide repeat-containing protein At3g20730 
 nta-r.1  107764614  pentatricopeptide repeat-containing protein At3g20730 
 nta-r.1  107784439  pentatricopeptide repeat-containing protein At3g20730-like 
 zma-u.5  103629919  pentatricopeptide repeat-containing protein At3g20730 
 tae-r.2  123190528  peroxidase 1 
 bdi-r.1  106865423  pentatricopeptide repeat-containing protein At3g20730 

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Top 50 coexpressed genes to 103835804 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103835804 (bra-r.6 coexpression data)

CoexMap"103869286"


braLOC103869286 | Entrez gene ID : 103869286
Species bra ghi cit ppo sly sot nta zma tae bdi vvi osa bna cre mtr sbi gma ath hvu
Paralog 1 2 1 1 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (422 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1857 genes)  IEA  
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_009145594.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_009145594.1)
Subcellular
localization
TargetP
scret 5,  other 5  (predict for XP_009145594.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bra-r.6
for
103835804


ghi-r.1
for
107929814


ghi-r.1
for
107902044


cit-r.1
for
102629517


ppo-u.5
for
7456325


sly-u.5
for
101243856


sot-r.1
for
102587579


nta-r.1
for
107764614


nta-r.1
for
107784439


zma-u.5
for
103629919


tae-r.2
for
123190528


bdi-r.1
for
106865423



Ortholog ID: 11318
Species bra ghi ghi cit ppo sly sot nta nta zma tae bdi
Symbol LOC103835804 LOC107929814 LOC107902044 LOC102629517 LOC7456325 LOC101243856 LOC102587579 LOC107764614 LOC107784439 LOC103629919 LOC123190528 LOC106865423
Function* pentatricopeptide repeat-containing protein At3g20730 pentatricopeptide repeat-containing protein At3g20730 pentatricopeptide repeat-containing protein At3g20730 pentatricopeptide repeat-containing protein At3g20730 pentatricopeptide repeat-containing protein At3g20730 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At3g20730 pentatricopeptide repeat-containing protein At3g20730 pentatricopeptide repeat-containing protein At3g20730-like pentatricopeptide repeat-containing protein At3g20730 peroxidase 1 pentatricopeptide repeat-containing protein At3g20730
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03020 RNA polymerase 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 10
bdi04120 Ubiquitin mediated proteolysis 9
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103835804 107929814 107902044 102629517 7456325 101243856 102587579 107764614 107784439 103629919 123190528 106865423
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