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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6  103869619  nuclear localization sequence-binding protein 

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Top 50 coexpressed genes to 103869619 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103869619 (bra-r.6 coexpression data)

CoexMap"103869619"


braLOC103869619 | Entrez gene ID : 103869619
Species bra ppo hvu mtr vvi tae nta cit ghi zma bdi sly sbi ath cre osa sot gma bna
Paralog 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp03015 [list] [network] mRNA surveillance pathway (205 genes)
brp03018 [list] [network] RNA degradation (187 genes)
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (258 genes)  IEA  
GO CC
GO:0005685 [list] [network] U1 snRNP  (42 genes)  IEA  
GO:0071004 [list] [network] U2-type prespliceosome  (45 genes)  IEA  
GO:0071011 [list] [network] precatalytic spliceosome  (71 genes)  IEA  
GO MF
GO:0030619 [list] [network] U1 snRNA binding  (14 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (432 genes)  IEA  
Protein XP_009145945.1 [sequence] [blastp]
XP_033147771.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 1,  mito 1  (predict for XP_009145945.1)
cyto 7,  chlo 1,  nucl 1,  mito 1,  E.R. 1,  chlo_mito 1  (predict for XP_033147771.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for XP_009145945.1)
other 8,  chlo 3  (predict for XP_033147771.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target

bra-r.6
for
103869619

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Ortholog ID: 13728
Species bra bna
Symbol LOC103869619 LOC106418493
Function* nuclear localization sequence-binding protein polyadenylate-binding protein 2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 3
bna03018 RNA degradation 3
bna00510 N-Glycan biosynthesis 2
bna00513 Various types of N-glycan biosynthesis 2
bna04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern
Entrez Gene ID* 103869619 106418493
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