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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103870104   U2 small nuclear ribonucleoprotein B'' 
 gma-u.5   100810989   RNA binding domain-containing protein 
 gma-u.5   100783764   uncharacterized LOC100783764 
 vvi-u.5   100263499   protein WHI4 
 ppo-u.5   18096737   protein WHI4 
 mtr-u.5   25500436   uncharacterized LOC25500436 
 sly-u.5   101245239   RNA-binding family protein 
 osa-u.5   4340149   U1 small nuclear ribonucleoprotein A 
 zma-u.5   100217110   uncharacterized LOC100217110 

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Top 50 coexpressed genes to 103870104 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103870104 (bra-r.6 coexpression data)

CoexMap"103870104"


braLOC103870104 | Entrez gene ID : 103870104    
Species bra gma vvi ppo mtr sly osa zma bdi hvu cit bna ath sbi ghi sot nta cre tae
Paralog 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (432 genes)  IEA  
Protein XP_009146460.2 [sequence] [blastp]
XP_009146461.2 [sequence] [blastp]
XP_009146463.2 [sequence] [blastp]
XP_033147820.1 [sequence] [blastp]
XP_033147821.1 [sequence] [blastp]
XP_033147822.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_009146460.2)
nucl 9  (predict for XP_009146461.2)
nucl 9  (predict for XP_009146463.2)
nucl 9  (predict for XP_033147820.1)
nucl 9  (predict for XP_033147821.1)
nucl 9  (predict for XP_033147822.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_009146460.2)
other 6,  mito 3  (predict for XP_009146461.2)
other 6,  mito 3  (predict for XP_009146463.2)
other 6,  mito 3  (predict for XP_033147820.1)
other 6,  mito 3  (predict for XP_033147821.1)
other 6,  mito 3  (predict for XP_033147822.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103870104
gma-u.5
for
100810989
gma-u.5
for
100783764
vvi-u.5
for
100263499
ppo-u.5
for
18096737
mtr-u.5
for
25500436
sly-u.5
for
101245239
osa-u.5
for
4340149
zma-u.5
for
100217110


Ortholog ID: 10765
Species bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC103870104 LOC106452298 LOC106440612 LOC107897387 LOC107916361 LOC102612402 LOC100783764 LOC100810989 LOC100263499 LOC18096737 LOC25500436 LOC101245239 LOC102592531 LOC107818002 LOC107823257 LOC4340149 LOC100217110 LOC123159451 LOC123167389 LOC123410820 LOC8068794 LOC100840294
Function* U2 small nuclear ribonucleoprotein B'' U2 small nuclear ribonucleoprotein B'' uncharacterized LOC106440612 U2 small nuclear ribonucleoprotein B'' U2 small nuclear ribonucleoprotein B'' U2 small nuclear ribonucleoprotein B'' uncharacterized LOC100783764 RNA binding domain-containing protein protein WHI4 protein WHI4 uncharacterized LOC25500436 RNA-binding family protein uncharacterized LOC102592531 uncharacterized LOC107818002 uncharacterized LOC107823257 U1 small nuclear ribonucleoprotein A uncharacterized LOC100217110 uncharacterized LOC123159451 uncharacterized LOC123167389 uncharacterized LOC123410820 uncharacterized LOC8068794 protein WHI3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 5
bna03420 Nucleotide excision repair 5
bna00040 Pentose and glucuronate interconversions 2
bna00520 Amino sugar and nucleotide sugar metabolism 2
bna01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 3
bna03420 Nucleotide excision repair 3
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 2
gma03082 ATP-dependent chromatin remodeling 2
gma03083 Polycomb repressive complex 2
gma03020 RNA polymerase 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
osa03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
tae03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03040 Spliceosome 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00010 Glycolysis / Gluconeogenesis 7
bdi01200 Carbon metabolism 7
bdi01230 Biosynthesis of amino acids 7
bdi00710 Carbon fixation by Calvin cycle 4
bdi00620 Pyruvate metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103870104 106452298 106440612 107897387 107916361 102612402 100783764 100810989 100263499 18096737 25500436 101245239 102592531 107818002 107823257 4340149 100217110 123159451 123167389 123410820 8068794 100840294
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