ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bra-r.6	103873146	xyloglucan endotransglucosylase/hydrolase protein 31
bra-r.6	103857641	probable xyloglucan endotransglucosylase/hydrolase protein 32
bra-r.6	103865563	probable xyloglucan endotransglucosylase/hydrolase protein 32
bna-r.1	106421233	xyloglucan endotransglucosylase/hydrolase protein 31
bna-r.1	125608319	probable xyloglucan endotransglucosylase/hydrolase protein 32
bna-r.1	125596939	probable xyloglucan endotransglucosylase/hydrolase protein 32
ath-u.5	XTH32	xyloglucan endotransglucosylase/hydrolase 32
ath-u.5	XTH31	xyloglucan endo-transglycosylase-related 8
ghi-r.1	107927050	xyloglucan endotransglucosylase/hydrolase protein 31
ghi-r.1	107899480	probable xyloglucan endotransglucosylase/hydrolase protein 32
cit-r.1	102630992	xyloglucan endotransglucosylase/hydrolase protein 31
gma-u.5	100792731	probable xyloglucan endotransglucosylase/hydrolase protein 32
gma-u.5	100817157	probable xyloglucan endotransglucosylase/hydrolase protein 32
gma-u.5	100813742	probable xyloglucan endotransglucosylase/hydrolase protein 32
vvi-u.5	100265471	probable xyloglucan endotransglucosylase/hydrolase protein 32
vvi-u.5	100255547	probable xyloglucan endotransglucosylase/hydrolase protein 32
ppo-u.5	18100141	probable xyloglucan endotransglucosylase/hydrolase protein 32
ppo-u.5	7491169	xyloglucan endotransglucosylase/hydrolase protein 31
ppo-u.5	7468802	probable xyloglucan endotransglucosylase/hydrolase protein 32
mtr-u.5	11407977	probable xyloglucan endotransglucosylase/hydrolase protein 32
mtr-u.5	25483954	probable xyloglucan endotransglucosylase/hydrolase protein 32
mtr-u.5	11418068	xyloglucan endotransglucosylase/hydrolase protein 31
sly-u.5	101259187	probable xyloglucan endotransglucosylase/hydrolase protein 32
sly-u.5	XTH6	xyloglucan endotransglucosylase-hydrolase XTH6
sot-r.1	102599489	xyloglucan endotransglucosylase/hydrolase protein 31-like
sot-r.1	102580643	probable xyloglucan endotransglucosylase/hydrolase protein 32
nta-r.1	107805355	putative xyloglucan endotransglucosylase/hydrolase protein 32
nta-r.1	107817239	xyloglucan endotransglucosylase/hydrolase protein 31-like
nta-r.1	107821674	putative xyloglucan endotransglucosylase/hydrolase protein 32
osa-u.5	4331336	probable xyloglucan endotransglucosylase/hydrolase protein 32
osa-u.5	4343230	probable xyloglucan endotransglucosylase/hydrolase protein 32
osa-u.5	4349281	xyloglucan endotransglucosylase/hydrolase protein 31
zma-u.5	118472983	xyloglucan endotransglucosylase/hydrolase protein 31-like
zma-u.5	100194192	uncharacterized LOC100194192
zma-u.5	100282047	xyloglucan endotransglucosylase/hydrolase protein 32
tae-r.2	123161579	xyloglucan endotransglucosylase/hydrolase protein 31
tae-r.2	123094002	xyloglucan endotransglucosylase/hydrolase protein 31
tae-r.2	123106164	xyloglucan endotransglucosylase/hydrolase protein 31
hvu-r.1	123447608	xyloglucan endotransglucosylase/hydrolase protein 31-like
hvu-r.1	123409211	probable xyloglucan endotransglucosylase/hydrolase protein 32
sbi-r.1	8077428	xyloglucan endotransglucosylase/hydrolase protein 31
sbi-r.1	8059509	xyloglucan endotransglucosylase/hydrolase protein 31
sbi-r.1	8062846	xyloglucan endotransglucosylase/hydrolase protein 31
bdi-r.1	100826830	xyloglucan endotransglucosylase/hydrolase protein 31
bdi-r.1	100834548	xyloglucan endotransglucosylase/hydrolase protein 31

Top 50 coexpressed genes to 103873146 (bra-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103873146 (bra-r.6 coexpression data)

CoexMap"103873146"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0010411 [list] [network] xyloglucan metabolic process	(91 genes)	IEA
GO:0042546 [list] [network] cell wall biogenesis	(190 genes)	IEA

GO CC

GO:0048046 [list] [network] apoplast	(94 genes)	IEA
GO:0005618 [list] [network] cell wall	(226 genes)	IEA

GO MF

GO:0016762 [list] [network] xyloglucan:xyloglucosyl transferase activity	(53 genes)	IEA
GO:0004553 [list] [network] hydrolase activity, hydrolyzing O-glycosyl compounds	(603 genes)	IEA

Protein

XP_009149823.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, cyto 1, extr 1, E.R. 1, cyto_E.R. 1

(predict for XP_009149823.1)

Subcellular
localization
TargetP

mito 5, scret 3

(predict for XP_009149823.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 103873146	bra-r.6 for 103857641	bra-r.6 for 103865563	bna-r.1 for 106421233	bna-r.1 for 125608319	bna-r.1 for 125596939	ath-u.5 for XTH32	ath-u.5 for XTH31	ghi-r.1 for 107927050	ghi-r.1 for 107899480	cit-r.1 for 102630992	gma-u.5 for 100792731	gma-u.5 for 100817157	gma-u.5 for 100813742	vvi-u.5 for 100265471	vvi-u.5 for 100255547	ppo-u.5 for 18100141	ppo-u.5 for 7491169	ppo-u.5 for 7468802	mtr-u.5 for 11407977	mtr-u.5 for 25483954	mtr-u.5 for 11418068	sly-u.5 for 101259187	sly-u.5 for XTH6	sot-r.1 for 102599489	sot-r.1 for 102580643	nta-r.1 for 107805355	nta-r.1 for 107817239	nta-r.1 for 107821674	osa-u.5 for 4331336	osa-u.5 for 4343230	osa-u.5 for 4349281	zma-u.5 for 118472983	zma-u.5 for 100194192	zma-u.5 for 100282047	tae-r.2 for 123161579	tae-r.2 for 123094002	tae-r.2 for 123106164	hvu-r.1 for 123447608	hvu-r.1 for 123409211	sbi-r.1 for 8077428	sbi-r.1 for 8059509	sbi-r.1 for 8062846	bdi-r.1 for 100826830	bdi-r.1 for 100834548

Ortholog

Ortholog ID: 1612

Species

bra

bna

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

XTH32

XTH31

XTH6

Function^*

xyloglucan endotransglucosylase/hydrolase protein 31