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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123099034   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 hvu-r.1   123450876   pentatricopeptide repeat-containing protein At3g60050-like 
 osa-u.5   4331425   pentatricopeptide repeat-containing protein At3g56030, mitochondrial 
 zma-u.5   100381604   Pentatricopeptide repeat-containing protein mitochondrial 
 gma-u.5   100777584   pentatricopeptide repeat-containing protein At1g09900 
 sly-u.5   101245075   pentatricopeptide repeat-containing protein 
 vvi-u.5   109121972   pentatricopeptide repeat-containing protein At1g05670, mitochondrial 
 ppo-u.5   7455264   pentatricopeptide repeat-containing protein At1g05670, mitochondrial 
 mtr-u.5   25495583   pentatricopeptide repeat-containing protein At1g09900 
 ghi-r.1   107954041   pentatricopeptide repeat-containing protein At2g18940, chloroplastic 
 ghi-r.1   121219128   pentatricopeptide repeat-containing protein At1g09900 
 sot-r.1   102590671   pentatricopeptide repeat-containing protein At1g09900-like 
 cit-r.1   107177063   pentatricopeptide repeat-containing protein At1g05670, mitochondrial-like 
 nta-r.1   107796685   uncharacterized LOC107796685 
 nta-r.1   107790835   uncharacterized LOC107790835 

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Top 50 coexpressed genes to 123099034 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123099034 (tae-r.2 coexpression data)

CoexMap"104582441"


bdiLOC104582441 | Entrez gene ID : 104582441      
Species tae hvu osa zma gma sly vvi ppo mtr ghi sot cit nta bra cre sbi ath bna bdi
Paralog 1 1 1 1 1 1 1 1 1 2 1 1 2 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_010230295.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for XP_010230295.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_010230295.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123099034
hvu-r.1
for
123450876
osa-u.5
for
4331425
zma-u.5
for
100381604
gma-u.5
for
100777584
sly-u.5
for
101245075
vvi-u.5
for
109121972
ppo-u.5
for
7455264
mtr-u.5
for
25495583
ghi-r.1
for
107954041
ghi-r.1
for
121219128
sot-r.1
for
102590671
cit-r.1
for
107177063
nta-r.1
for
107796685
nta-r.1
for
107790835


Ortholog ID: 12576
Species tae hvu osa zma gma sly vvi ppo mtr ghi ghi sot cit nta nta
Symbol LOC123099034 LOC123450876 LOC4331425 LOC100381604 LOC100777584 LOC101245075 LOC109121972 LOC7455264 LOC25495583 LOC107954041 LOC121219128 LOC102590671 LOC107177063 LOC107796685 LOC107790835
Function* pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g60050-like pentatricopeptide repeat-containing protein At3g56030, mitochondrial Pentatricopeptide repeat-containing protein mitochondrial pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g05670, mitochondrial pentatricopeptide repeat-containing protein At1g05670, mitochondrial pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900-like pentatricopeptide repeat-containing protein At1g05670, mitochondrial-like uncharacterized LOC107796685 uncharacterized LOC107790835
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 7
osa00630 Glyoxylate and dicarboxylate metabolism 6
osa00260 Glycine, serine and threonine metabolism 5
osa01230 Biosynthesis of amino acids 4
osa00670 One carbon pool by folate 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi03013 Nucleocytoplasmic transport 3
ghi00790 Folate biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi03013 Nucleocytoplasmic transport 3
ghi00790 Folate biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123099034 123450876 4331425 100381604 100777584 101245075 109121972 7455264 25495583 107954041 121219128 102590671 107177063 107796685 107790835
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