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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107790835   uncharacterized LOC107790835 
 nta-r.1   107796685   uncharacterized LOC107796685 
 sly-u.5   101245075   pentatricopeptide repeat-containing protein 
 sot-r.1   102590671   pentatricopeptide repeat-containing protein At1g09900-like 
 gma-u.5   100777584   pentatricopeptide repeat-containing protein At1g09900 
 vvi-u.5   109121972   pentatricopeptide repeat-containing protein At1g05670, mitochondrial 
 ppo-u.5   7455264   pentatricopeptide repeat-containing protein At1g05670, mitochondrial 
 mtr-u.5   25495583   pentatricopeptide repeat-containing protein At1g09900 
 ghi-r.1   107954041   pentatricopeptide repeat-containing protein At2g18940, chloroplastic 
 ghi-r.1   121219128   pentatricopeptide repeat-containing protein At1g09900 
 cit-r.1   107177063   pentatricopeptide repeat-containing protein At1g05670, mitochondrial-like 
 osa-u.5   4331425   pentatricopeptide repeat-containing protein At3g56030, mitochondrial 
 zma-u.5   100381604   Pentatricopeptide repeat-containing protein mitochondrial 
 tae-r.2   123099034   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 hvu-r.1   123450876   pentatricopeptide repeat-containing protein At3g60050-like 

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Top 50 coexpressed genes to 107790835 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107790835 (nta-r.1 coexpression data)

CoexMap"107790835"


ntaLOC107790835 | Entrez gene ID : 107790835      
Species nta sly sot gma vvi ppo mtr ghi cit osa zma tae hvu cre bra ath bna bdi sbi
Paralog 2 1 1 1 1 1 1 2 1 1 1 1 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_075108343.1 [sequence] [blastp]
XP_075108344.1 [sequence] [blastp]
XP_075108345.1 [sequence] [blastp]
XP_075108346.1 [sequence] [blastp]
XP_075108347.1 [sequence] [blastp]
XP_075108348.1 [sequence] [blastp]
XP_075108349.1 [sequence] [blastp]
XP_075108350.1 [sequence] [blastp]
XP_075108351.1 [sequence] [blastp]
XP_075108352.1 [sequence] [blastp]
XP_075108353.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  mito 1,  E.R. 1  (predict for XP_075108343.1)
chlo 8,  nucl 1,  mito 1,  E.R. 1  (predict for XP_075108344.1)
chlo 8,  nucl 1,  mito 1,  E.R. 1  (predict for XP_075108345.1)
chlo 8,  nucl 1,  mito 1,  E.R. 1  (predict for XP_075108346.1)
chlo 8,  nucl 1,  mito 1,  E.R. 1  (predict for XP_075108347.1)
chlo 8,  nucl 1,  mito 1,  E.R. 1  (predict for XP_075108348.1)
chlo 8,  nucl 1,  mito 1,  E.R. 1  (predict for XP_075108349.1)
chlo 8,  nucl 1,  mito 1,  E.R. 1  (predict for XP_075108350.1)
chlo 8,  nucl 1,  mito 1,  E.R. 1  (predict for XP_075108351.1)
chlo 8,  nucl 1,  mito 1,  E.R. 1  (predict for XP_075108352.1)
chlo 8,  nucl 1,  mito 1,  E.R. 1  (predict for XP_075108353.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_075108343.1)
chlo 5  (predict for XP_075108344.1)
chlo 5  (predict for XP_075108345.1)
chlo 5  (predict for XP_075108346.1)
chlo 5  (predict for XP_075108347.1)
chlo 5  (predict for XP_075108348.1)
chlo 5  (predict for XP_075108349.1)
chlo 5  (predict for XP_075108350.1)
chlo 5  (predict for XP_075108351.1)
chlo 5  (predict for XP_075108352.1)
chlo 5  (predict for XP_075108353.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107790835
nta-r.1
for
107796685
sly-u.5
for
101245075
sot-r.1
for
102590671
gma-u.5
for
100777584
vvi-u.5
for
109121972
ppo-u.5
for
7455264
mtr-u.5
for
25495583
ghi-r.1
for
107954041
ghi-r.1
for
121219128
cit-r.1
for
107177063
osa-u.5
for
4331425
zma-u.5
for
100381604
tae-r.2
for
123099034
hvu-r.1
for
123450876


Ortholog ID: 12576
Species nta nta sly sot gma vvi ppo mtr ghi ghi cit osa zma tae hvu
Symbol LOC107790835 LOC107796685 LOC101245075 LOC102590671 LOC100777584 LOC109121972 LOC7455264 LOC25495583 LOC107954041 LOC121219128 LOC107177063 LOC4331425 LOC100381604 LOC123099034 LOC123450876
Function* uncharacterized LOC107790835 uncharacterized LOC107796685 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g09900-like pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g05670, mitochondrial pentatricopeptide repeat-containing protein At1g05670, mitochondrial pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g05670, mitochondrial-like pentatricopeptide repeat-containing protein At3g56030, mitochondrial Pentatricopeptide repeat-containing protein mitochondrial pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g60050-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi03013 Nucleocytoplasmic transport 3
ghi00790 Folate biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi03013 Nucleocytoplasmic transport 3
ghi00790 Folate biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 7
osa00630 Glyoxylate and dicarboxylate metabolism 6
osa00260 Glycine, serine and threonine metabolism 5
osa01230 Biosynthesis of amino acids 4
osa00670 One carbon pool by folate 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107790835 107796685 101245075 102590671 100777584 109121972 7455264 25495583 107954041 121219128 107177063 4331425 100381604 123099034 123450876
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