ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	4343997	E3 ubiquitin-protein ligase SIRP1-like
zma-u.5	100285280	ubiquitin-protein ligase CIP8
ath-u.5	AT1G14200	RING/U-box superfamily protein
ath-u.5	AT1G26800	RING/U-box superfamily protein
gma-u.5	100819587	E3 ubiquitin-protein ligase MPSR1
sly-u.5	101248573	E3 ubiquitin-protein ligase MPSR1
vvi-u.5	100255065	E3 ubiquitin-protein ligase MPSR1
ppo-u.5	7463037	E3 ubiquitin-protein ligase RING1
ppo-u.5	7498174	E3 ubiquitin-protein ligase MPSR1
ppo-u.5	7492935	E3 ubiquitin-protein ligase MPSR1
mtr-u.5	11412793	E3 ubiquitin-protein ligase MPSR1

functional annotation

KEGG

GO BP

GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process

(273 genes)

IEA

GO CC

GO MF

GO:0061630 [list] [network] ubiquitin protein ligase activity

(193 genes)

IEA

Protein

XP_010239520.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, nucl 3, chlo 2, mito 1, extr 1

(predict for XP_010239520.1)

Subcellular
localization
TargetP

other 7

(predict for XP_010239520.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4343997	zma-u.5 for 100285280	ath-u.5 for AT1G14200	ath-u.5 for AT1G26800	gma-u.5 for 100819587	sly-u.5 for 101248573	vvi-u.5 for 100255065	ppo-u.5 for 7463037	ppo-u.5 for 7498174	ppo-u.5 for 7492935	mtr-u.5 for 11412793

Ortholog ID: 2299

Species

bdi

tae

hvu

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

cit

Symbol

Function^*

E3 ubiquitin-protein ligase RNF181

E3 ubiquitin-protein ligase RING1-like

E3 ubiquitin-protein ligase RING1

RING-H2 finger protein ATL78

E3 ubiquitin-protein ligase CIP8-like

ubiquitin-protein ligase CIP8

E3 ubiquitin-protein ligase RING1-like

RING/U-box superfamily protein

E3 ubiquitin-protein ligase MPSR1

E3 ubiquitin-protein ligase MPSR1-like

E3 ubiquitin-protein ligase MPSR1

E3 ubiquitin-protein ligase RING1

E3 ubiquitin-protein ligase MPSR1

E3 ubiquitin-protein ligase MPSR1-like

E3 ubiquitin-protein ligase MPSR1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00460	Cyanoamino acid metabolism	2
bdi00630	Glyoxylate and dicarboxylate metabolism	2
bdi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	5
bdi03040	Spliceosome	3
bdi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00270	Cysteine and methionine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00270	Cysteine and methionine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	5
hvu03040	Spliceosome	3
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	6
gma03040	Spliceosome	4
gma04144	Endocytosis	3
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	3
bna04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	3
bna04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	4
cit04626	Plant-pathogen interaction	2

Expression

Expression pattern

Entrez Gene ID^*

104583698

100832618

123184947

123040933

123425189

100285280

8079365

839223

837980

100819587

101248573

103872115

117127545

100255065

7492935

7463037

11412793

107890448

107890197

106415885

106397503

102613681

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4343997 (osa-u.5 coexpression data)

Top 50 enrichment test to 4343997 (osa-u.5 coexpression data)


Species	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	1	1	2	1	1	1	3	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4343997 (osa-u.5 coexpression data)

Top 50 enrichment test to 4343997 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**