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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7463037   E3 ubiquitin-protein ligase RING1 
 ppo-r.4   7463037   E3 ubiquitin-protein ligase RING1 
 ppo-m.4   7463037   E3 ubiquitin-protein ligase RING1 
 ppo-u.5   7492935   E3 ubiquitin-protein ligase MPSR1 
 ppo-u.5   7498174   E3 ubiquitin-protein ligase MPSR1 
 gma-u.5   100819587   E3 ubiquitin-protein ligase MPSR1 
 mtr-u.5   11412793   E3 ubiquitin-protein ligase MPSR1 
 ath-u.5   AT1G14200   RING/U-box superfamily protein 
 ath-u.5   AT1G26800   RING/U-box superfamily protein 
 bra-r.6   117127545   E3 ubiquitin-protein ligase MPSR1-like 
 bra-r.6   103872115   E3 ubiquitin-protein ligase MPSR1-like 
 bra-r.6   103842990   E3 ubiquitin-protein ligase MPSR1 
 vvi-u.5   100255065   E3 ubiquitin-protein ligase MPSR1 
 ghi-r.1   107892426   E3 ubiquitin-protein ligase RNF181 
 ghi-r.1   107890197   E3 ubiquitin-protein ligase MPSR1 
 bna-r.1   106346489   E3 ubiquitin-protein ligase MPSR1 
 bna-r.1   106415885   E3 ubiquitin-protein ligase MPSR1-like 
 cit-r.1   102613681   E3 ubiquitin-protein ligase MPSR1 
 sly-u.5   101248573   E3 ubiquitin-protein ligase MPSR1 
 sot-r.1   102602628   E3 ubiquitin-protein ligase RING1-like 
 nta-r.1   107778694   uncharacterized LOC107778694 
 nta-r.1   107782551   uncharacterized LOC107782551 
 osa-u.5   4343997   E3 ubiquitin-protein ligase SIRP1-like 
 zma-u.5   100285280   ubiquitin-protein ligase CIP8 
 tae-r.2   123184947   E3 ubiquitin-protein ligase RING1 
 tae-r.2   123048954   E3 ubiquitin-protein ligase RDUF1 
 tae-r.2   123040933   RING-H2 finger protein ATL78 
 hvu-r.1   123425189   E3 ubiquitin-protein ligase CIP8-like 
 sbi-r.1   8079365   E3 ubiquitin-protein ligase RING1-like 
 bdi-r.1   100832618   E3 ubiquitin-protein ligase RING1-like 

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Top 50 coexpressed genes to 7463037 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7463037 (ppo-u.5 coexpression data)

CoexMap"7463037"


ppoLOC7463037 | Entrez gene ID : 7463037    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 1 1 2 3 1 2 2 1 1 1 2 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (417 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (6111 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (225 genes)  IEA  
Protein XP_024455887.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 3,  nucl 2,  extr 1,  cysk 1  (predict for XP_024455887.2)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for XP_024455887.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7463037
ppo-r.4
for
7463037
ppo-m.4
for
7463037
ppo-u.5
for
7492935
ppo-u.5
for
7498174
gma-u.5
for
100819587
mtr-u.5
for
11412793
ath-u.5
for
AT1G14200
ath-u.5
for
AT1G26800
bra-r.6
for
117127545
bra-r.6
for
103872115
bra-r.6
for
103842990
vvi-u.5
for
100255065
ghi-r.1
for
107892426
ghi-r.1
for
107890197
bna-r.1
for
106346489
bna-r.1
for
106415885
cit-r.1
for
102613681
sly-u.5
for
101248573
sot-r.1
for
102602628
nta-r.1
for
107778694
nta-r.1
for
107782551
osa-u.5
for
4343997
zma-u.5
for
100285280
tae-r.2
for
123184947
tae-r.2
for
123048954
tae-r.2
for
123040933
hvu-r.1
for
123425189
sbi-r.1
for
8079365
bdi-r.1
for
100832618


Ortholog ID: 2299
Species ppo ppo ppo gma mtr ath ath bra bra bra vvi ghi ghi ghi bna bna cit sly sot osa zma tae tae tae hvu sbi bdi bdi
Symbol LOC7463037 LOC7492935 LOC7498174 LOC100819587 LOC11412793 AT1G14200 AT1G26800 LOC117127545 LOC103872115 LOC103842990 LOC100255065 LOC107890197 LOC107960359 LOC107890448 LOC106415885 LOC106397503 LOC102613681 LOC101248573 LOC102602628 LOC4332965 LOC100285280 LOC123184947 LOC123048954 LOC123040933 LOC123425189 LOC8079365 LOC100832618 LOC104583698
Function* E3 ubiquitin-protein ligase RING1 E3 ubiquitin-protein ligase MPSR1 E3 ubiquitin-protein ligase MPSR1 E3 ubiquitin-protein ligase MPSR1 E3 ubiquitin-protein ligase MPSR1 RING/U-box superfamily protein RING/U-box superfamily protein E3 ubiquitin-protein ligase MPSR1-like E3 ubiquitin-protein ligase MPSR1-like E3 ubiquitin-protein ligase MPSR1 E3 ubiquitin-protein ligase MPSR1 E3 ubiquitin-protein ligase MPSR1 E3 ubiquitin-protein ligase SIRP1 E3 ubiquitin-protein ligase MPSR1 E3 ubiquitin-protein ligase MPSR1-like E3 ubiquitin-protein ligase MPSR1-like E3 ubiquitin-protein ligase MPSR1 E3 ubiquitin-protein ligase MPSR1 E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RDUF1 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase RING1 E3 ubiquitin-protein ligase RDUF1 RING-H2 finger protein ATL78 E3 ubiquitin-protein ligase CIP8-like E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RNF181
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 6
gma03040 Spliceosome 4
gma04144 Endocytosis 3
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 3
bna04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 3
bna04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 4
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 5
hvu03040 Spliceosome 3
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 5
bdi03040 Spliceosome 3
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00460 Cyanoamino acid metabolism 2
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7463037 7492935 7498174 100819587 11412793 837980 839223 117127545 103872115 103842990 100255065 107890197 107960359 107890448 106415885 106397503 102613681 101248573 102602628 4332965 100285280 123184947 123048954 123040933 123425189 8079365 100832618 104583698
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