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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   104644735   large ribosomal subunit protein eL18y 
 sly-r.6   104644735   large ribosomal subunit protein eL18y 
 sly-m.5   104644735   large ribosomal subunit protein eL18y 
 sly-u.5   101267842   large ribosomal subunit protein eL18y 
 sot-r.1   102585572   60S ribosomal protein L18-2 
 sot-r.1   102604004   60S ribosomal protein L18-2 
 nta-r.1   107829591   large ribosomal subunit protein eL18y 
 nta-r.1   107829615   large ribosomal subunit protein eL18y-like 
 nta-r.1   107830489   large ribosomal subunit protein eL18y 
 ath-u.5   RPL18   ribosomal protein L18 
 ath-u.5   AT5G27850   Ribosomal protein L18e/L15 superfamily protein 
 gma-u.5   100500164   uncharacterized LOC100500164 
 gma-u.5   100306301   60S ribosomal protein L18 
 gma-u.5   100499789   uncharacterized LOC100499789 
 bra-r.6   103859102   60S ribosomal protein L18-2 
 bra-r.6   103837163   60S ribosomal protein L18-2 
 bra-r.6   103854677   60S ribosomal protein L18-2 
 vvi-u.5   100250430   large ribosomal subunit protein eL18y 
 vvi-u.5   100256800   large ribosomal subunit protein eL18y 
 ppo-u.5   7478929   60S ribosomal protein L18-2 
 ppo-u.5   7487794   60S ribosomal protein L18-2 
 ppo-u.5   7491291   60S ribosomal protein L18-2 
 mtr-u.5   11408011   60S ribosomal protein L18-3 
 mtr-u.5   11435125   60S ribosomal protein L18 
 mtr-u.5   25499599   60S ribosomal protein L18-3 
 ghi-r.1   107888323   60S ribosomal protein L18-2 
 ghi-r.1   107893558   60S ribosomal protein L18-2 
 ghi-r.1   107912363   60S ribosomal protein L18-2 
 bna-r.1   125606370   60S ribosomal protein L18-2 
 bna-r.1   111214160   60S ribosomal protein L18-2-like 
 bna-r.1   111213725   60S ribosomal protein L18-2-like 
 cit-r.1   102627244   60S ribosomal protein L18-2 
 cit-r.1   102612174   60S ribosomal protein L18-2 
 osa-u.5   4337849   60S ribosomal protein L18-3 
 osa-u.5   4332793   large ribosomal subunit protein eL18x 
 osa-u.5   4344265   large ribosomal subunit protein eL18x 
 zma-u.5   103635488   60S ribosomal protein L18-3 
 zma-u.5   100192878   60S ribosomal protein L18-3 
 zma-u.5   100194344   60S ribosomal protein L18-like 
 tae-r.2   123043719   60S ribosomal protein L18-2 
 tae-r.2   123051577   60S ribosomal protein L18-2 
 tae-r.2   123092186   60S ribosomal protein L18-3 
 hvu-r.1   123425939   60S ribosomal protein L18-2-like 
 hvu-r.1   123424740   60S ribosomal protein L18-2-like 
 sbi-r.1   8083654   60S ribosomal protein L18-3 
 sbi-r.1   8078545   60S ribosomal protein L18-3 
 sbi-r.1   8069537   60S ribosomal protein L18-3 
 bdi-r.1   100832221   60S ribosomal protein L18-3 
 bdi-r.1   100840309   60S ribosomal protein L18-2 
 bdi-r.1   104581783   60S ribosomal protein L18-2 
 cre-r.1   CHLRE_12g512600v5   ribosomal protein L18 

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Top 50 coexpressed genes to 104644735 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 104644735 (sly-u.5 coexpression data)

CoexMap""


slyLOC104644735 | Entrez gene ID : 104644735    
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 2 3 2 3 3 2 3 3 3 3 2 3 3 3 2 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
Function large ribosomal subunit protein eL18y
KEGG sly03010 [list] [network] Ribosome (6225 genes)
GO BP
GO:0006412 [list] [network] translation  (492 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (140 genes)  IEA  
GO:0005840 [list] [network] ribosome  (354 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (342 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
Protein XP_010313195.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  chlo 1  (predict for XP_010313195.1)
Subcellular
localization
TargetP
other 8  (predict for XP_010313195.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
104644735
sly-r.6
for
104644735
sly-m.5
for
104644735
sly-u.5
for
101267842
sot-r.1
for
102585572
sot-r.1
for
102604004
nta-r.1
for
107829591
nta-r.1
for
107829615
nta-r.1
for
107830489
ath-u.5
for
RPL18
ath-u.5
for
AT5G27850
gma-u.5
for
100500164
gma-u.5
for
100306301
gma-u.5
for
100499789
bra-r.6
for
103859102
bra-r.6
for
103837163
bra-r.6
for
103854677
vvi-u.5
for
100250430
vvi-u.5
for
100256800
ppo-u.5
for
7478929
ppo-u.5
for
7487794
ppo-u.5
for
7491291
mtr-u.5
for
11408011
mtr-u.5
for
11435125
mtr-u.5
for
25499599
ghi-r.1
for
107888323
ghi-r.1
for
107893558
ghi-r.1
for
107912363
bna-r.1
for
125606370
bna-r.1
for
111214160
bna-r.1
for
111213725
cit-r.1
for
102627244
cit-r.1
for
102612174
osa-u.5
for
4337849
osa-u.5
for
4332793
osa-u.5
for
4344265
zma-u.5
for
103635488
zma-u.5
for
100192878
zma-u.5
for
100194344
tae-r.2
for
123043719
tae-r.2
for
123051577
tae-r.2
for
123092186
hvu-r.1
for
123425939
hvu-r.1
for
123424740
sbi-r.1
for
8083654
sbi-r.1
for
8078545
sbi-r.1
for
8069537
bdi-r.1
for
100832221
bdi-r.1
for
100840309
bdi-r.1
for
104581783
cre-r.1
for
CHLRE_12g512600v5

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Ortholog ID: 1498
Species sly sly sot sot nta nta nta ath ath gma gma gma bra bra bra vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit osa osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol LOC104644735 LOC101267842 LOC102585572 LOC102604004 LOC107829591 LOC107778886 LOC107774248 RPL18 AT5G27850 LOC100499789 LOC100527681 LOC100791657 LOC103859102 LOC103854677 LOC103849912 LOC100250430 LOC100256800 LOC7478929 LOC7487794 LOC18098647 LOC11408011 LOC11435125 LOC25499599 LOC107893558 LOC107893287 LOC107949639 LOC111214160 LOC111203407 LOC106379880 LOC102627244 LOC102612174 LOC4337849 LOC4332793 LOC4344265 LOC103635488 LOC100192878 LOC100194344 LOC123051577 LOC123187508 LOC123113585 LOC123425939 LOC123424740 LOC8083654 LOC8078545 LOC8069537 LOC100832221 LOC100840309 LOC104581783 CHLRE_12g512600v5
Function* large ribosomal subunit protein eL18y large ribosomal subunit protein eL18y 60S ribosomal protein L18-2 60S ribosomal protein L18-2 large ribosomal subunit protein eL18y large ribosomal subunit protein eL18y large ribosomal subunit protein eL18y ribosomal protein L18 Ribosomal protein L18e/L15 superfamily protein uncharacterized LOC100499789 ribosomal protein L18 60S ribosomal protein L18 60S ribosomal protein L18-2 60S ribosomal protein L18-2 60S ribosomal protein L18-2 large ribosomal subunit protein eL18y large ribosomal subunit protein eL18y 60S ribosomal protein L18-2 60S ribosomal protein L18-2 60S ribosomal protein L18-2 60S ribosomal protein L18-3 60S ribosomal protein L18 60S ribosomal protein L18-3 60S ribosomal protein L18-2 60S ribosomal protein L18-2 60S ribosomal protein L18-2 60S ribosomal protein L18-2-like 60S ribosomal protein L18-2-like 60S ribosomal protein L18-2 60S ribosomal protein L18-2 60S ribosomal protein L18-2 60S ribosomal protein L18-3 large ribosomal subunit protein eL18x large ribosomal subunit protein eL18x 60S ribosomal protein L18-3 60S ribosomal protein L18-3 60S ribosomal protein L18-like 60S ribosomal protein L18-2 60S ribosomal protein L18-2 60S ribosomal protein L18-2 60S ribosomal protein L18-2-like 60S ribosomal protein L18-2-like 60S ribosomal protein L18-3 60S ribosomal protein L18-3 60S ribosomal protein L18-3 60S ribosomal protein L18-3 60S ribosomal protein L18-2 60S ribosomal protein L18-2 ribosomal protein L18
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 18
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 19
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 21
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 21
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
ghi03015 mRNA surveillance pathway 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
bna03030 DNA replication 2
bna03420 Nucleotide excision repair 2
bna03430 Mismatch repair 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 21
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 104644735 101267842 102585572 102604004 107829591 107778886 107774248 819725 832848 100499789 100527681 100791657 103859102 103854677 103849912 100250430 100256800 7478929 7487794 18098647 11408011 11435125 25499599 107893558 107893287 107949639 111214160 111203407 106379880 102627244 102612174 4337849 4332793 4344265 103635488 100192878 100194344 123051577 123187508 123113585 123425939 123424740 8083654 8078545 8069537 100832221 100840309 104581783 5716607
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