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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   104645763   ROP GTPases family protein 
 sly-r.6   104645763   ROP GTPases family protein 
 sly-m.5   104645763   ROP GTPases family protein 
 sly-u.5   101244348   rac-like GTP-binding protein RHO1 
 sly-u.5   101250317   rac-like GTP-binding protein ARAC7 
 sly-u.5   101251031   rac-like GTP-binding protein 5 
 sot-r.1   102578267   rac-like GTP-binding protein ARAC7 
 sot-r.1   102597002   rac-like GTP-binding protein ARAC7 
 sot-r.1   102580734   rac-like GTP-binding protein RAC13 
 nta-r.1   107830059   rac-like GTP-binding protein ARAC7 
 nta-r.1   107829207   rac-like GTP-binding protein RHO1 
 nta-r.1   107810713   rac-like GTP-binding protein 3 
 ath-u.5   ROP2   RHO-related protein from plants 2 
 ath-u.5   ROP10   RHO-related protein from plants 10 
 gma-u.5   100785464   rac-like GTP-binding protein RAC1 
 gma-u.5   100782967   rac-like GTP-binding protein RAC2 
 bra-r.6   103874723   rac-like GTP-binding protein ARAC10 
 bra-r.6   103855028   rac-like GTP-binding protein ARAC10 
 vvi-u.5   100256456   rac-like GTP-binding protein 5 
 vvi-u.5   100242140   Rac-like GTP-binding protein ARAC5 
 vvi-u.5   100243817   rac-like GTP-binding protein ARAC1 
 ppo-u.5   18105098   rac-like GTP-binding protein RAC2 
 ppo-u.5   18104560   rac-like GTP-binding protein RAC2 
 ppo-u.5   18103773   rac-like GTP-binding protein ARAC8 
 mtr-u.5   25493052   rac-like GTP-binding protein RAC13 
 mtr-u.5   25489548   rac-like GTP-binding protein ARAC8 
 mtr-u.5   25487731   rac-like GTP-binding protein RAC2 
 ghi-r.1   107916005   rac-like GTP-binding protein ARAC4 
 ghi-r.1   107916764   rac-like GTP-binding protein ARAC3 
 ghi-r.1   107922248   rac-like GTP-binding protein ARAC3 
 bna-r.1   125598863   rac-like GTP-binding protein ARAC10 
 bna-r.1   106381780   rac-like GTP-binding protein ARAC2 
 cit-r.1   102630577   rac-like GTP-binding protein RAC1 
 cit-r.1   102625805   rac-like GTP-binding protein ARAC7 
 osa-u.5   4339304   rac-like GTP-binding protein 2 
 osa-u.5   4328116   rac-like GTP-binding protein 6 
 osa-u.5   4331272   rac-like GTP-binding protein 5 
 zma-u.5   542017   rop6 protein 
 zma-u.5   541930   GTPase protein 
 zma-u.5   541774   Rop3 small GTP binding protein 
 tae-r.2   123131904   rac-like GTP-binding protein 6 
 tae-r.2   123182622   rac-like GTP-binding protein 2 
 hvu-r.1   123402167   rac-like GTP-binding protein 6 
 hvu-r.1   123403076   rac-like GTP-binding protein 5 
 hvu-r.1   123443253   rac-like GTP-binding protein 1 
 sbi-r.1   8068254   rac-like GTP-binding protein 6 
 sbi-r.1   8067502   rac-like GTP-binding protein 2 
 sbi-r.1   8058272   rac-like GTP-binding protein 1 
 bdi-r.1   100828208   rac-like GTP-binding protein 6 
 bdi-r.1   100832255   rac-like GTP-binding protein 7 
 bdi-r.1   100838482   rac-like GTP-binding protein 3 

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Top 50 coexpressed genes to 104645763 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 104645763 (sly-u.5 coexpression data)

CoexMap"104645763"


slyLOC104645763 | Entrez gene ID : 104645763      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 6 3 3 2 2 2 3 3 3 3 2 2 3 3 2 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly04145 [list] [network] Phagosome (91 genes)
sly04148 [list] [network] Efferocytosis (57 genes)
sly04517 [list] [network] IgSF CAM signaling (47 genes)
sly04518 [list] [network] Integrin signaling (12 genes)
sly04620 [list] [network] Toll-like receptor signaling pathway (12 genes)
sly05100 [list] [network] Bacterial invasion of epithelial cells (26 genes)
GO BP
GO:0007163 [list] [network] establishment or maintenance of cell polarity  (12 genes)  IEA  
GO:0008360 [list] [network] regulation of cell shape  (13 genes)  IEA  
GO:0032956 [list] [network] regulation of actin cytoskeleton organization  (19 genes)  IEA  
GO:0007264 [list] [network] small GTPase-mediated signal transduction  (21 genes)  IEA  
GO:0030865 [list] [network] cortical cytoskeleton organization  (24 genes)  IEA  
GO CC
GO:0042995 [list] [network] cell projection  (13 genes)  IEA  
GO:0005856 [list] [network] cytoskeleton  (249 genes)  IEA  
GO:0031410 [list] [network] cytoplasmic vesicle  (300 genes)  IEA  
GO MF
GO:0019901 [list] [network] protein kinase binding  (27 genes)  IEA  
GO:0003924 [list] [network] GTPase activity  (208 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (239 genes)  IEA  
Protein NP_001315263.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 3,  plas 3,  cyto_plas 3  (predict for NP_001315263.1)
Subcellular
localization
TargetP
other 5,  scret 4  (predict for NP_001315263.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
104645763
sly-r.6
for
104645763
sly-m.5
for
104645763
sly-u.5
for
101244348
sly-u.5
for
101250317
sly-u.5
for
101251031
sot-r.1
for
102578267
sot-r.1
for
102597002
sot-r.1
for
102580734
nta-r.1
for
107830059
nta-r.1
for
107829207
nta-r.1
for
107810713
ath-u.5
for
ROP2
ath-u.5
for
ROP10
gma-u.5
for
100785464
gma-u.5
for
100782967
bra-r.6
for
103874723
bra-r.6
for
103855028
vvi-u.5
for
100256456
vvi-u.5
for
100242140
vvi-u.5
for
100243817
ppo-u.5
for
18105098
ppo-u.5
for
18104560
ppo-u.5
for
18103773
mtr-u.5
for
25493052
mtr-u.5
for
25489548
mtr-u.5
for
25487731
ghi-r.1
for
107916005
ghi-r.1
for
107916764
ghi-r.1
for
107922248
bna-r.1
for
125598863
bna-r.1
for
106381780
cit-r.1
for
102630577
cit-r.1
for
102625805
osa-u.5
for
4339304
osa-u.5
for
4328116
osa-u.5
for
4331272
zma-u.5
for
542017
zma-u.5
for
541930
zma-u.5
for
541774
tae-r.2
for
123131904
tae-r.2
for
123182622
hvu-r.1
for
123402167
hvu-r.1
for
123403076
hvu-r.1
for
123443253
sbi-r.1
for
8068254
sbi-r.1
for
8067502
sbi-r.1
for
8058272
bdi-r.1
for
100828208
bdi-r.1
for
100832255
bdi-r.1
for
100838482


Ortholog ID: 142
Species sly sly sly sot sot sot nta nta nta ath ath gma bra bra vvi vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi
Symbol LOC101250317 LOC101252165 LOC101253160 LOC102578267 LOC102585889 LOC102598995 LOC107830059 LOC107798337 LOC107768360 RAC6 RAC10 LOC100806681 LOC103845915 LOC103841051 LOC100253515 LOC100253703 LOC100266265 LOC18105098 LOC18103099 LOC7475516 LOC25493052 LOC25487731 LOC11438687 LOC107929665 LOC107910702 LOC107901252 LOC106402832 LOC106405388 LOC125574922 LOC102625805 LOC102608421 LOC4339304 LOC4331272 LOC4340590 LOC542739 LOC542503 LOC542758 LOC123131904 LOC123182622 LOC123139099 LOC123403076 LOC123443253 LOC123413539 LOC8068254 LOC8058272 LOC8065540 LOC100828208 LOC100838482 LOC100833165
Function* rac-like GTP-binding protein ARAC7 rac-like GTP-binding protein 3 rac-like GTP-binding protein ARAC7 rac-like GTP-binding protein ARAC7 rac-like GTP-binding protein ARAC1 rac-like GTP-binding protein 5 rac-like GTP-binding protein ARAC7 rac-like GTP-binding protein RHO1 rac-like GTP-binding protein RHO1 RAC-like 6 RAC-like 10 rac-like GTP-binding protein ARAC8 rac-like GTP-binding protein ARAC1 rac-like GTP-binding protein RHO1 rac-like GTP-binding protein 3 rac-like GTP-binding protein RAC1 rac-like GTP-binding protein ARAC7 rac-like GTP-binding protein RAC2 rac-like GTP-binding protein RAC13 rac-like GTP-binding protein ARAC8 rac-like GTP-binding protein RAC13 rac-like GTP-binding protein RAC2 rac-like GTP-binding protein RHO1 rac-like GTP-binding protein 5 rac-like GTP-binding protein 5 rac-like GTP-binding protein ARAC7 rac-like GTP-binding protein ARAC5 rac-like GTP-binding protein ARAC10 rac-like GTP-binding protein ARAC10 rac-like GTP-binding protein ARAC7 rac-like GTP-binding protein ARAC8 rac-like GTP-binding protein 2 rac-like GTP-binding protein 5 rac-like GTP-binding protein 4 Rho-related protein from plants 4 Rho-related protein from plants 7 Rho-related protein from plants 5 rac-like GTP-binding protein 6 rac-like GTP-binding protein 2 rac-like GTP-binding protein 5 rac-like GTP-binding protein 5 rac-like GTP-binding protein 1 rac-like GTP-binding protein 4 rac-like GTP-binding protein 6 rac-like GTP-binding protein 1 rac-like GTP-binding protein 4 rac-like GTP-binding protein 6 rac-like GTP-binding protein 3 rac-like GTP-binding protein 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04517 IgSF CAM signaling 3
sly04814 Motor proteins 3
sly04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot04141 Protein processing in endoplasmic reticulum 3
sot04144 Endocytosis 3
sot04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 8
nta00260 Glycine, serine and threonine metabolism 6
nta01200 Carbon metabolism 6
nta00220 Arginine biosynthesis 4
nta00250 Alanine, aspartate and glutamate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01250 Biosynthesis of nucleotide sugars 5
nta04145 Phagosome 4
nta04148 Efferocytosis 4
nta04517 IgSF CAM signaling 4
nta04518 Integrin signaling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01250 Biosynthesis of nucleotide sugars 6
nta00520 Amino sugar and nucleotide sugar metabolism 4
nta04145 Phagosome 4
nta04148 Efferocytosis 4
nta04517 IgSF CAM signaling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04145 Phagosome 3
ath04148 Efferocytosis 3
ath04517 IgSF CAM signaling 2
ath04518 Integrin signaling 2
ath04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04145 Phagosome 3
ath04148 Efferocytosis 3
ath04517 IgSF CAM signaling 3
ath04518 Integrin signaling 3
ath04620 Toll-like receptor signaling pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra03420 Nucleotide excision repair 2
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 3
vvi04130 SNARE interactions in vesicular transport 2
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04145 Phagosome 3
vvi04517 IgSF CAM signaling 3
vvi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00260 Glycine, serine and threonine metabolism 2
ppo00630 Glyoxylate and dicarboxylate metabolism 2
ppo00670 One carbon pool by folate 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04145 Phagosome 3
ppo00190 Oxidative phosphorylation 2
ppo04142 Lysosome 2
ppo04141 Protein processing in endoplasmic reticulum 2
ppo00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
mtr00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 4
mtr04144 Endocytosis 3
mtr04145 Phagosome 2
mtr04148 Efferocytosis 2
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi04517 IgSF CAM signaling 2
ghi04518 Integrin signaling 2
ghi04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04145 Phagosome 4
ghi04148 Efferocytosis 4
ghi04517 IgSF CAM signaling 4
ghi04518 Integrin signaling 4
ghi04620 Toll-like receptor signaling pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi04517 IgSF CAM signaling 2
ghi04518 Integrin signaling 2
ghi04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04145 Phagosome 8
bna04148 Efferocytosis 8
bna04517 IgSF CAM signaling 8
bna04518 Integrin signaling 8
bna04620 Toll-like receptor signaling pathway 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04145 Phagosome 9
bna04148 Efferocytosis 9
bna04517 IgSF CAM signaling 9
bna04518 Integrin signaling 9
bna04620 Toll-like receptor signaling pathway 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04145 Phagosome 9
bna04148 Efferocytosis 9
bna04517 IgSF CAM signaling 9
bna04518 Integrin signaling 9
bna04620 Toll-like receptor signaling pathway 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00240 Pyrimidine metabolism 3
cit01232 Nucleotide metabolism 3
cit02010 ABC transporters 2
cit00230 Purine metabolism 2
cit00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04145 Phagosome 2
zma04148 Efferocytosis 2
zma04517 IgSF CAM signaling 2
zma04518 Integrin signaling 2
zma04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
zma04145 Phagosome 2
zma04148 Efferocytosis 2
zma04517 IgSF CAM signaling 2
zma04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04145 Phagosome 2
zma04148 Efferocytosis 2
zma04517 IgSF CAM signaling 2
zma04518 Integrin signaling 2
zma04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04145 Phagosome 4
tae04148 Efferocytosis 4
tae04517 IgSF CAM signaling 4
tae04518 Integrin signaling 4
tae04620 Toll-like receptor signaling pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae04145 Phagosome 3
tae04148 Efferocytosis 3
tae04517 IgSF CAM signaling 3
tae04518 Integrin signaling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04517 IgSF CAM signaling 7
tae04518 Integrin signaling 7
tae04120 Ubiquitin mediated proteolysis 3
tae04145 Phagosome 3
tae04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
hvu00600 Sphingolipid metabolism 2
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00520 Amino sugar and nucleotide sugar metabolism 2
sbi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04145 Phagosome 2
sbi04517 IgSF CAM signaling 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00062 Fatty acid elongation 4
bdi01040 Biosynthesis of unsaturated fatty acids 4
bdi01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
bdi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 3
bdi04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101250317 101252165 101253160 102578267 102585889 102598995 107830059 107798337 107768360 829750 836408 100806681 103845915 103841051 100253515 100253703 100266265 18105098 18103099 7475516 25493052 25487731 11438687 107929665 107910702 107901252 106402832 106405388 125574922 102625805 102608421 4339304 4331272 4340590 542739 542503 542758 123131904 123182622 123139099 123403076 123443253 123413539 8068254 8058272 8065540 100828208 100838482 100833165
The preparation time of this page was 2.4 [sec].