ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	104877428	putative disease resistance protein RGA1
vvi-r.5	104877428	putative disease resistance protein RGA1
vvi-u.5	109124342	putative disease resistance protein RGA3
vvi-u.5	104878831	putative disease resistance protein RGA3
gma-u.5	100776884	disease resistance protein RGA2
ppo-u.5	18106509	disease resistance protein RGA2
mtr-u.5	11423553	putative disease resistance protein RGA4
mtr-u.5	11423554	putative disease resistance protein RGA4
mtr-u.5	11424880	putative disease resistance protein RGA4
osa-u.5	4341916	putative disease resistance protein RGA3
osa-u.5	4348157	putative disease resistance protein RGA1
osa-u.5	112937416	putative disease resistance protein RGA1

functional annotation

KEGG

GO BP

GO:0098542 [list] [network] defense response to other organism

(396 genes)

IEA

GO CC

GO MF

GO:0043531 [list] [network] ADP binding

(588 genes)

IEA

Protein

XP_010649305.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, chlo 1, nucl 1, mito 1, plas 1, cysk_nucl 1, mito_plas 1

(predict for XP_010649305.1)

Subcellular
localization
TargetP

scret 8, other 3

(predict for XP_010649305.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 104877428	vvi-r.5 for 104877428	vvi-u.5 for 109124342	vvi-u.5 for 104878831	gma-u.5 for 100776884	ppo-u.5 for 18106509	mtr-u.5 for 11423553	mtr-u.5 for 11423554	mtr-u.5 for 11424880	osa-u.5 for 4341916	osa-u.5 for 4348157	osa-u.5 for 112937416

Ortholog ID: 581

Species

vvi

gma

mtr

ghi

cit

sot

nta

osa

tae

sbi

Symbol

Function^*

putative disease resistance protein RGA4

putative disease resistance RPP13-like protein 1

putative disease resistance protein RGA4

putative disease resistance protein RGA1

disease resistance protein RGA2-like

putative disease resistance protein RGA1

putative disease resistance protein RGA3

putative disease resistance protein RGA1

putative disease resistance protein RGA3

putative disease resistance protein RGA1

putative disease resistance protein RGA3

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	4
vvi04626	Plant-pathogen interaction	3
vvi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00562	Inositol phosphate metabolism	2
mtr04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae02010	ABC transporters	3
tae00061	Fatty acid biosynthesis	2
tae00071	Fatty acid degradation	2
tae01212	Fatty acid metabolism	2
tae04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

100853803

100780033

112416775

11418125

107963684

102614307

107178555

102578439

102578701

142163055

112937321

4341916

123146078

110430984

8063800

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 104877428 (vvi-u.5 coexpression data)

Top 50 enrichment test to 104877428 (vvi-u.5 coexpression data)


Species	vvi	gma	ppo	mtr	osa	bdi	hvu	bra	cit	bna	ath	sbi	sly	ghi	sot	nta	cre	tae	zma
Paralog	4	1	1	3	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 104877428 (vvi-u.5 coexpression data)

Top 50 enrichment test to 104877428 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**