Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   104878976   pentatricopeptide repeat-containing protein At3g62890 
 vvi-r.5   104878976   pentatricopeptide repeat-containing protein At3g62890 
 vvi-u.5   100242438   pentatricopeptide repeat-containing protein ELI1, chloroplastic 
 vvi-u.5   104882530   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 cre-r.1   CHLRE_01g025950v5   uncharacterized protein 

close


Top 50 coexpressed genes to 104878976 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 104878976 (vvi-u.5 coexpression data)

CoexMap"104878976"


vviLOC104878976 | Entrez gene ID : 104878976    
Species vvi cre bdi bna ppo sbi gma ghi cit hvu sot sly nta osa tae zma mtr ath bra
Paralog 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (811 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_010648293.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  cyto 1,  vacu 1,  E.R. 1,  cyto_nucl 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_010648293.1)
Subcellular
localization
TargetP
other 4  (predict for XP_010648293.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
104878976
vvi-r.5
for
104878976
vvi-u.5
for
100242438
vvi-u.5
for
104882530
cre-r.1
for
CHLRE_01g025950v5


Ortholog ID: 23925
Species vvi vvi vvi cre
Symbol LOC104878976 LOC100242438 LOC104882530 CHLRE_01g025950v5
Function* pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein ELI1, chloroplastic pentatricopeptide repeat-containing protein At3g24000, mitochondrial uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 104878976 100242438 104882530 5715288
The preparation time of this page was 0.0 [sec].