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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100248351   sister chromatid cohesion protein PDS5 homolog C 
 vvi-u.5   100260975   sister chromatid cohesion protein PDS5 homolog C 
 ath-u.5   AT4G31880   transcriptional regulator 
 ath-u.5   AT5G10950   Tudor/PWWP/MBT superfamily protein 
 ath-u.5   AT1G15940   Tudor/PWWP/MBT superfamily protein 
 gma-u.5   100812058   uncharacterized LOC100812058 
 ppo-u.5   7493222   sister chromatid cohesion protein PDS5 homolog D 
 ppo-u.5   7493403   uncharacterized LOC7493403 
 ppo-u.5   7485299   sister chromatid cohesion protein PDS5 homolog C 
 mtr-u.5   11442229   triadin 
 mtr-u.5   25491183   uncharacterized LOC25491183 
 mtr-u.5   11437017   sister chromatid cohesion protein PDS5 
 sly-u.5   101246231   sister chromatid cohesion protein PDS5 homolog E 
 sly-u.5   101253678   sister chromatid cohesion protein PDS5 homolog D-like 
 osa-u.5   9266945   sister chromatid cohesion protein PDS5 homolog C 
 osa-u.5   4336311   sister chromatid cohesion protein PDS5 homolog C 
 osa-u.5   4335488   sister chromatid cohesion protein PDS5 homolog D 
 zma-u.5   103654690   sister chromatid cohesion protein PDS5 homolog B-B-like 
 zma-u.5   109939418   uncharacterized LOC109939418 
 zma-u.5   103646255   titin homolog 

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Top 50 coexpressed genes to 100248351 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100248351 (vvi-u.5 coexpression data)

CoexMap"104880340"


vviLOC104880340 | Entrez gene ID : 104880340    
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 2 3 1 3 3 2 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0007064 [list] [network] mitotic sister chromatid cohesion  (20 genes)  IEA  
GO:0006281 [list] [network] DNA repair  (227 genes)  IEA  
GO CC
GO:0000785 [list] [network] chromatin  (159 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2597 genes)  IEA  
GO MF
Protein XP_059595828.1 [sequence] [blastp]
Subcellular
localization
wolf
golg 4,  cyto 3,  vacu 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_059595828.1)
Subcellular
localization
TargetP
other 5  (predict for XP_059595828.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100248351
vvi-u.5
for
100260975
ath-u.5
for
AT4G31880
ath-u.5
for
AT5G10950
ath-u.5
for
AT1G15940
gma-u.5
for
100812058
ppo-u.5
for
7493222
ppo-u.5
for
7493403
ppo-u.5
for
7485299
mtr-u.5
for
11442229
mtr-u.5
for
25491183
mtr-u.5
for
11437017
sly-u.5
for
101246231
sly-u.5
for
101253678
osa-u.5
for
9266945
osa-u.5
for
4336311
osa-u.5
for
4335488
zma-u.5
for
103654690
zma-u.5
for
109939418
zma-u.5
for
103646255


Ortholog ID: 597
Species vvi vvi ath ath gma bra bra ppo ppo mtr mtr ghi ghi bna bna cit cit sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre cre
Symbol LOC100248351 LOC100260975 AT1G15940 AT1G80810 LOC100812058 LOC103855892 LOC103842872 LOC7493403 LOC7487059 LOC11442229 LOC11423336 LOC107906837 LOC107906838 LOC106420502 LOC106430760 LOC102614026 LOC102624143 LOC101246231 LOC102605879 LOC102591295 LOC107767311 LOC107772436 LOC9266945 LOC4335488 LOC103654690 LOC103646255 LOC123045941 LOC123144807 LOC123427162 LOC123401818 LOC8059675 LOC8071467 LOC100823597 LOC100825062 CHLRE_02g099601v5 CHLRE_01g032550v5
Function* sister chromatid cohesion protein PDS5 homolog C sister chromatid cohesion protein PDS5 homolog C Tudor/PWWP/MBT superfamily protein Tudor/PWWP/MBT superfamily protein uncharacterized LOC100812058 DEAD-box ATP-dependent RNA helicase 28 cinnamoyl-CoA reductase 1 uncharacterized LOC7493403 sister chromatid cohesion protein PDS5 homolog D triadin muscle M-line assembly protein unc-89 triadin triadin sister chromatid cohesion protein PDS5 homolog C-like sister chromatid cohesion protein PDS5 homolog D-like sister chromatid cohesion protein PDS5 homolog C-like sister chromatid cohesion protein PDS5 homolog C sister chromatid cohesion protein PDS5 homolog E muscle M-line assembly protein unc-89 uncharacterized LOC102591295 sister chromatid cohesion protein PDS5 homolog D sister chromatid cohesion protein PDS5 homolog C-like sister chromatid cohesion protein PDS5 homolog C sister chromatid cohesion protein PDS5 homolog D sister chromatid cohesion protein PDS5 homolog B-B-like titin homolog nucleolar protein dao-5 neurofilament heavy polypeptide ABC transporter F family member 4-like neurofilament heavy polypeptide-like microtubule-associated protein futsch MATH and LRR domain-containing protein PFE0570w muscle M-line assembly protein unc-89 uncharacterized LOC100825062 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00310 Lysine degradation 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03250 Viral life cycle - HIV-1 2
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03410 Base excision repair 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 3
bdi03013 Nucleocytoplasmic transport 2
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100248351 100260975 838164 844420 100812058 103855892 103842872 7493403 7487059 11442229 11423336 107906837 107906838 106420502 106430760 102614026 102624143 101246231 102605879 102591295 107767311 107772436 9266945 4335488 103654690 103646255 123045941 123144807 123427162 123401818 8059675 8071467 100823597 100825062 66052408 5715404
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