ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
vvi-u.5	104880856	ABSCISIC ACID-INSENSITIVE 5-like protein 6
vvi-r.5	104880856	ABSCISIC ACID-INSENSITIVE 5-like protein 6
vvi-u.5	100250466	ABSCISIC ACID-INSENSITIVE 5-like protein 6
vvi-u.5	100262305	G-box-binding factor 4
ath-u.5	AT5G44080	Basic-leucine zipper (bZIP) transcription factor family protein
ath-u.5	GBF4	G-box binding factor 4
gma-u.5	BZIP9	bZIP transcription factor bZIP9
gma-u.5	100808917	G-box-binding factor 4
bra-r.6	103844297	G-box-binding factor 4
bra-r.6	103827928	G-box-binding factor 4
ppo-u.5	7467814	G-box-binding factor 4
ppo-u.5	7492469	G-box-binding factor 4
mtr-u.5	11415254	G-box-binding factor 4
ghi-r.1	121222473	G-box-binding factor 4
ghi-r.1	107951616	G-box-binding factor 4
ghi-r.1	107925466	ABSCISIC ACID-INSENSITIVE 5-like protein 4
bna-r.1	106397022	G-box-binding factor 4-like
bna-r.1	106410484	G-box-binding factor 4
bna-r.1	106410476	G-box-binding factor 4-like
cit-r.1	102608488	G-box-binding factor 4-like
cit-r.1	102616186	G-box-binding factor 4
sly-u.5	101244482	G-box-binding factor 4
sly-u.5	101258010	bZIP transcription factor 12
sot-r.1	102596569	ABSCISIC ACID-INSENSITIVE 5-like protein 5
sot-r.1	102585425	G-box-binding factor 4-like
nta-r.1	107811488	G-box-binding factor 4-like
nta-r.1	107773674	bZIP transcription factor 12
nta-r.1	107806890	G-box-binding factor 4
osa-u.5	4338907	bZIP transcription factor 12-like
osa-u.5	4325078	bZIP transcription factor 12-like
zma-u.5	103628426	bZIP transcription factor 12
zma-u.5	103636447	bZIP transcription factor 12
tae-r.2	123134785	bZIP transcription factor 12
tae-r.2	123182152	bZIP transcription factor 12
tae-r.2	123057522	bZIP transcription factor 12
hvu-r.1	123444801	bZIP transcription factor 12-like
hvu-r.1	123446630	bZIP transcription factor 12-like
sbi-r.1	8062379	G-box-binding factor 4
sbi-r.1	8058517	G-box-binding factor 4
bdi-r.1	100825393	bZIP transcription factor 12
bdi-r.1	100836332	bZIP transcription factor 12

Top 50 coexpressed genes to 104880856 (vvi-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 104880856 (vvi-u.5 coexpression data)

CoexMap"104880856"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0045893 [list] [network] positive regulation of DNA-templated transcription

(218 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(2597 genes)

IEA

GO MF

GO:0003700 [list] [network] DNA-binding transcription factor activity

(925 genes)

IEA

Protein

XP_010657161.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, nucl 1, cyto 1, plas 1, extr 1, cysk_nucl 1, cyto_plas 1

(predict for XP_010657161.1)

Subcellular
localization
TargetP

other 8, chlo 3

(predict for XP_010657161.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 104880856	vvi-r.5 for 104880856	vvi-u.5 for 100250466	vvi-u.5 for 100262305	ath-u.5 for AT5G44080	ath-u.5 for GBF4	gma-u.5 for BZIP9	gma-u.5 for 100808917	bra-r.6 for 103844297	bra-r.6 for 103827928	ppo-u.5 for 7467814	ppo-u.5 for 7492469	mtr-u.5 for 11415254	ghi-r.1 for 121222473	ghi-r.1 for 107951616	ghi-r.1 for 107925466	bna-r.1 for 106397022	bna-r.1 for 106410484	bna-r.1 for 106410476	cit-r.1 for 102608488	cit-r.1 for 102616186	sly-u.5 for 101244482	sly-u.5 for 101258010	sot-r.1 for 102596569	sot-r.1 for 102585425	nta-r.1 for 107811488	nta-r.1 for 107773674	nta-r.1 for 107806890	osa-u.5 for 4338907	osa-u.5 for 4325078	zma-u.5 for 103628426	zma-u.5 for 103636447	tae-r.2 for 123134785	tae-r.2 for 123182152	tae-r.2 for 123057522	hvu-r.1 for 123444801	hvu-r.1 for 123446630	sbi-r.1 for 8062379	sbi-r.1 for 8058517	bdi-r.1 for 100825393	bdi-r.1 for 100836332

Ortholog

Ortholog ID: 2757

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

GBF4

BZIP10

Function^*

ABSCISIC ACID-INSENSITIVE 5-like protein 6

G-box-binding factor 4

Basic-leucine zipper (bZIP) transcription factor family protein

G-box binding factor 4

transcription factor bZIP10

G-box-binding factor 4

G-box-binding factor 4-like

G-box-binding factor 4

G-box-binding factor 4-like

G-box-binding factor 4

bZIP transcription factor 12

ABSCISIC ACID-INSENSITIVE 5-like protein 5

G-box-binding factor 4-like

G-box-binding factor 4

bZIP transcription factor 12-like

bZIP transcription factor 12

uncharacterized LOC100280716

bZIP transcription factor 12

bZIP transcription factor 12-like

G-box-binding factor 4

bZIP transcription factor 12

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00071	Fatty acid degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	4
ath04120	Ubiquitin mediated proteolysis	2
ath04141	Protein processing in endoplasmic reticulum	2
ath04142	Lysosome	2
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00230	Purine metabolism	2
gma00240	Pyrimidine metabolism	2
gma01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	6
ppo04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	6
ghi03440	Homologous recombination	2
ghi00500	Starch and sucrose metabolism	2
ghi04626	Plant-pathogen interaction	2
ghi00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2
ghi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2
ghi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	5
bna04075	Plant hormone signal transduction	2
bna03050	Proteasome	2
bna04141	Protein processing in endoplasmic reticulum	2
bna04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	2
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4
bna04075	Plant hormone signal transduction	2
bna03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	3
sot03040	Spliceosome	3
sot04130	SNARE interactions in vesicular transport	2
sot04145	Phagosome	2
sot03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	2
nta00600	Sphingolipid metabolism	2
nta04148	Efferocytosis	2
nta04016	MAPK signaling pathway - plant	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	2
nta00600	Sphingolipid metabolism	2
nta04148	Efferocytosis	2
nta04075	Plant hormone signal transduction	2
nta04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	4
nta04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03015	mRNA surveillance pathway	2
osa00620	Pyruvate metabolism	2
osa00630	Glyoxylate and dicarboxylate metabolism	2
osa01200	Carbon metabolism	2
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	13
zma04016	MAPK signaling pathway - plant	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	3
tae00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	3
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	7
tae04016	MAPK signaling pathway - plant	3
tae03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	5
hvu04141	Protein processing in endoplasmic reticulum	2
hvu03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	8
sbi04016	MAPK signaling pathway - plant	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	3

Expression

Expression pattern

Entrez Gene ID^*

104880856

100250466

100262305

834431

839356

100101890

102659969

103844297

103827928

7467814

7492469

11415254

121222473

107951616

107910461

106397022

106410476

106370949

102608488

102616186

101244482

101258010

102596569

102585425

107811488

107806890

107817339

4338907

4325078

103628426

100280716

123134785

123182152

123071541

123444801

123446630

8062379

8058517

100825393

100836332

The preparation time of this page was 0.1 [sec].


Species	vvi	ath	gma	bra	ppo	mtr	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	2	2	2	1	3	3	2	2	2	3	2	2	3	2	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 104880856 (vvi-u.5 coexpression data)

Top 50 enrichment test to 104880856 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**