ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100256959	uncharacterized LOC100256959
ath-u.5	AT3G47890	Ubiquitin carboxyl-terminal hydrolase-related protein
ath-u.5	AT3G47910	Ubiquitin carboxyl-terminal hydrolase-related protein
gma-u.5	100799759	uncharacterized LOC100799759
gma-u.5	100800030	uncharacterized LOC100800030
ppo-u.5	18105820	uncharacterized LOC18105820
ppo-u.5	7484760	uncharacterized LOC7484760
mtr-u.5	25493801	uncharacterized LOC25493801
sly-u.5	101250879	uncharacterized LOC101250879
sly-u.5	101248307	uncharacterized LOC101248307
osa-u.5	4331732	uncharacterized LOC4331732
zma-u.5	100194097	uncharacterized LOC100194097
zma-u.5	100274180	Ubiquitin carboxyl-terminal hydrolase-related protein

functional annotation

KEGG

GO BP

GO:0016579 [list] [network] protein deubiquitination

(60 genes)

IEA

GO CC

GO MF

GO:0004843 [list] [network] cysteine-type deubiquitinase activity	(49 genes)	IEA
GO:0005515 [list] [network] protein binding	(4232 genes)	IEA

Protein

XP_019080415.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, cyto 4

(predict for XP_019080415.1)

Subcellular
localization
TargetP

other 4

(predict for XP_019080415.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100256959	ath-u.5 for AT3G47890	ath-u.5 for AT3G47910	gma-u.5 for 100799759	gma-u.5 for 100800030	ppo-u.5 for 18105820	ppo-u.5 for 7484760	mtr-u.5 for 25493801	sly-u.5 for 101250879	sly-u.5 for 101248307	osa-u.5 for 4331732	zma-u.5 for 100194097	zma-u.5 for 100274180

Ortholog ID: 4574

Species

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

Ubiquitin carboxyl-terminal hydrolase-related protein

uncharacterized LOC100799759

uncharacterized LOC100800030

uncharacterized LOC103873186

uncharacterized LOC103873189

uncharacterized LOC7484760

uncharacterized LOC25493801

uncharacterized LOC121209611

uncharacterized LOC107950099

uncharacterized LOC106389548

uncharacterized LOC106410298

uncharacterized LOC102612465

uncharacterized LOC101248307

uncharacterized LOC101250879

uncharacterized LOC102605106

uncharacterized LOC102592123

uncharacterized LOC107764486

uncharacterized LOC107796036

uncharacterized LOC4331732

Ubiquitin carboxyl-terminal hydrolase-related protein

uncharacterized LOC100194097

uncharacterized LOC123084815

uncharacterized LOC123093267

uncharacterized LOC123449531

uncharacterized LOC8059839

uncharacterized LOC100846067

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03082	ATP-dependent chromatin remodeling	2
ath04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00562	Inositol phosphate metabolism	2
ppo04070	Phosphatidylinositol signaling system	2
ppo00250	Alanine, aspartate and glutamate metabolism	2
ppo00910	Nitrogen metabolism	2
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	3
mtr00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00310	Lysine degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00310	Lysine degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00562	Inositol phosphate metabolism	2
bna04070	Phosphatidylinositol signaling system	2
bna04144	Endocytosis	2
bna03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	3
sly03083	Polycomb repressive complex	2
sly03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00310	Lysine degradation	2
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	3
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04136	Autophagy - other	2
tae04518	Integrin signaling	2
tae03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04136	Autophagy - other	2
tae04518	Integrin signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2
bdi03083	Polycomb repressive complex	2
bdi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03040	Spliceosome	8
cre03082	ATP-dependent chromatin remodeling	2

Expression

Expression pattern

Entrez Gene ID^*

823944

823946

100799759

100800030

103873186

103873189

7484760

25493801

121209611

107950099

106389548

106410298

102612465

101248307

101250879

102605106

102592123

107764486

107796036

4331732

100274180

100194097

123084815

123093267

123449531

8059839

100846067

5716517

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100256959 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100256959 (vvi-u.5 coexpression data)


Species	vvi	ath	gma	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	1	2	2	2	1	2	1	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100256959 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100256959 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**