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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106346072   non-structural maintenance of chromosomes element 4 homolog A 
 ath-u.5   AT3G20760   Nse4, component of Smc5/6 DNA repair complex 
 ath-u.5   AT1G51130   Nse4, component of Smc5/6 DNA repair complex 
 gma-u.5   100792117   non-structural maintenance of chromosomes element 4 homolog A 
 gma-u.5   100817716   non-structural maintenance of chromosome element 4-like 
 vvi-u.5   100255522   non-structural maintenance of chromosomes element 4 homolog A 
 ppo-u.5   7468934   non-structural maintenance of chromosomes element 4 homolog A 
 ppo-u.5   7461392   non-structural maintenance of chromosomes element 4 homolog A 
 mtr-u.5   11443787   non-structural maintenance of chromosomes element 4 homolog A 
 sly-u.5   101251938   non-structural maintenance of chromosomes element 4 homolog A 
 sly-u.5   101263499   non-structural maintenance of chromosomes element 4 homolog A-like 
 osa-u.5   4328600   non-structural maintenance of chromosomes element 4 homolog A 
 zma-u.5   100193130   Non-structural maintenance of chromosomes element 4 homolog A 
 zma-u.5   103632802   non-structural maintenance of chromosomes element 4 homolog A 
 zma-u.5   100381918   Non-structural maintenance of chromosomes element 4 homolog A 

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Top 50 coexpressed genes to 106346072 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106346072 (bna-r.1 coexpression data)

CoexMap"106346072"


bnaLOC106346072 | Entrez gene ID : 106346072    
Species bna ath gma vvi ppo mtr sly osa zma sot hvu tae cit sbi ghi cre nta bdi bra
Paralog 1 2 2 1 2 1 2 1 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006281 [list] [network] DNA repair  (1192 genes)  IEA  
GO CC
GO:0030915 [list] [network] Smc5-Smc6 complex  (19 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
Protein XP_013640768.2 [sequence] [blastp]
Subcellular
localization
wolf
E.R. 4,  chlo 3,  mito 1,  plas 1,  mito_plas 1  (predict for XP_013640768.2)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for XP_013640768.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106346072

.
ath-u.5
for
AT3G20760

.
ath-u.5
for
AT1G51130

.
gma-u.5
for
100792117

.
gma-u.5
for
100817716

.
vvi-u.5
for
100255522

.
ppo-u.5
for
7468934

.
ppo-u.5
for
7461392

.
mtr-u.5
for
11443787

.
sly-u.5
for
101251938

.
sly-u.5
for
101263499

.
osa-u.5
for
4328600

.
zma-u.5
for
100193130

.
zma-u.5
for
103632802

.
zma-u.5
for
100381918

.


Ortholog ID: 2411
Species ath ath gma gma sly zma zma bra bra vvi ppo mtr tae tae hvu hvu ghi ghi bna bna cre sot cit cit bdi bdi nta
Symbol AT1G51130 AT3G20760 LOC100817716 LOC100792117 LOC101251938 LOC100193130 LOC100276605 LOC103871301 LOC103868585 LOC100255522 LOC7461392 LOC11443787 LOC123144232 LOC123156376 LOC123412774 LOC123403142 LOC107950854 LOC107928863 LOC125609530 LOC111207240 CHLRE_04g215650v5 LOC102606189 LOC102620982 LOC102609635 LOC100822599 LOC100827892 LOC107781380
Function* Nse4, component of Smc5/6 DNA repair complex Nse4, component of Smc5/6 DNA repair complex non-structural maintenance of chromosome element 4-like non-structural maintenance of chromosomes element 4 homolog A non-structural maintenance of chromosomes element 4 homolog A Non-structural maintenance of chromosomes element 4 homolog A Non-structural maintenance of chromosomes element 4 homolog A non-structural maintenance of chromosomes element 4 homolog A non-structural maintenance of chromosomes element 4 homolog A non-structural maintenance of chromosomes element 4 homolog A non-structural maintenance of chromosomes element 4 homolog A non-structural maintenance of chromosomes element 4 homolog A non-structural maintenance of chromosomes element 4 homolog A non-structural maintenance of chromosomes element 4 homolog A non-structural maintenance of chromosomes element 4 homolog A-like non-structural maintenance of chromosomes element 4 homolog A-like non-structural maintenance of chromosomes element 4 homolog B non-structural maintenance of chromosomes element 4 homolog A non-structural maintenance of chromosomes element 4 homolog A-like non-structural maintenance of chromosomes element 4 homolog A uncharacterized protein non-structural maintenance of chromosomes element 4 homolog A-like non-structural maintenance of chromosomes element 4 homolog A-like non-structural maintenance of chromosomes element 4 homolog A non-structural maintenance of chromosomes element 4 homolog B non-structural maintenance of chromosomes element 4 homolog A non-structural maintenance of chromosomes element 4 homolog A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 6
gma03420 Nucleotide excision repair 5
gma03430 Mismatch repair 5
gma03440 Homologous recombination 3
gma03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04814 Motor proteins 2
ppo03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 3
hvu00010 Glycolysis / Gluconeogenesis 2
hvu00020 Citrate cycle (TCA cycle) 2
hvu00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00270 Cysteine and methionine metabolism 2
sot03030 DNA replication 2
sot03410 Base excision repair 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 5
nta03030 DNA replication 3
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841536 821624 100817716 100792117 101251938 100193130 100276605 103871301 103868585 100255522 7461392 11443787 123144232 123156376 123412774 123403142 107950854 107928863 125609530 111207240 5724275 102606189 102620982 102609635 100822599 100827892 107781380
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