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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106346683   pinin 
 bna-r.1   106439985   pinin 
 bna-r.1   106363108   uncharacterized LOC106363108 
 bra-r.6   103872307   pinin 
 bra-r.6   103843175   pinin 
 ath-u.5   AT1G15200   protein-protein interaction regulator family protein 
 ghi-r.1   107939223   pinin 
 ghi-r.1   107928887   pinin 
 cit-r.1   102625418   uncharacterized LOC102625418 
 gma-u.5   100801958   pinin 
 gma-u.5   100801229   pinin 
 vvi-u.5   100245237   uncharacterized LOC100245237 
 ppo-u.5   7478153   uncharacterized LOC7478153 
 ppo-u.5   7470527   uncharacterized LOC7470527 
 mtr-u.5   11421161   pinin 
 sly-u.5   101248146   uncharacterized LOC101248146 
 sot-r.1   102599072   pinin 
 nta-r.1   107803145   uncharacterized LOC107803145 
 nta-r.1   107768853   uncharacterized LOC107768853 
 osa-u.5   4333834   uncharacterized LOC4333834 
 zma-u.5   100283191   pinin/SDK/memA/ protein conserved region containing protein 
 zma-u.5   100191788   putative pinin_SDK_memA domain family protein 
 tae-r.2   123090803   pinin 
 tae-r.2   123095811   pinin 
 tae-r.2   123087161   pinin 
 hvu-r.1   123447339   pinin 
 sbi-r.1   8063414   pinin 
 bdi-r.1   100834865   pinin 
 cre-r.1   CHLRE_09g387300v5   uncharacterized protein 

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Top 50 coexpressed genes to 106346683 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106346683 (bna-r.1 coexpression data)

CoexMap"106346683"


bnaLOC106346683 | Entrez gene ID : 106346683    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 1 2 1 2 1 2 1 1 1 2 1 2 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03013 [list] [network] Nucleocytoplasmic transport (328 genes)
bna03015 [list] [network] mRNA surveillance pathway (420 genes)
GO BP
GO CC
GO:0071013 [list] [network] catalytic step 2 spliceosome  (222 genes)  IEA  
GO MF
Protein XP_013641537.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3  (predict for XP_013641537.2)
Subcellular
localization
TargetP
other 8,  chlo 4  (predict for XP_013641537.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106346683
bna-r.1
for
106439985
bna-r.1
for
106363108
bra-r.6
for
103872307
bra-r.6
for
103843175
ath-u.5
for
AT1G15200
ghi-r.1
for
107939223
ghi-r.1
for
107928887
cit-r.1
for
102625418
gma-u.5
for
100801958
gma-u.5
for
100801229
vvi-u.5
for
100245237
ppo-u.5
for
7478153
ppo-u.5
for
7470527
mtr-u.5
for
11421161
sly-u.5
for
101248146
sot-r.1
for
102599072
nta-r.1
for
107803145
nta-r.1
for
107768853
osa-u.5
for
4333834
zma-u.5
for
100283191
zma-u.5
for
100191788
tae-r.2
for
123090803
tae-r.2
for
123095811
tae-r.2
for
123087161
hvu-r.1
for
123447339
sbi-r.1
for
8063414
bdi-r.1
for
100834865
cre-r.1
for
CHLRE_09g387300v5


Ortholog ID: 7033
Species bna bna bra bra ath ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC106439985 LOC106415643 LOC103872307 LOC103843175 AT1G15200 LOC107939223 LOC107928887 LOC102625418 LOC100801958 LOC100801229 LOC100245237 LOC7478153 LOC7470527 LOC11421161 LOC101248146 LOC102599072 LOC107803145 LOC107768853 LOC4333834 LOC100283191 LOC100191788 LOC123095811 LOC123087161 LOC123082082 LOC123447339 LOC8063414 LOC100834865 CHLRE_09g387300v5
Function* pinin pinin-like pinin pinin protein-protein interaction regulator family protein pinin pinin uncharacterized LOC102625418 pinin pinin uncharacterized LOC100245237 uncharacterized LOC7478153 uncharacterized LOC7470527 pinin uncharacterized LOC101248146 pinin uncharacterized LOC107803145 uncharacterized LOC107768853 uncharacterized LOC4333834 pinin/SDK/memA/ protein conserved region containing protein putative pinin_SDK_memA domain family protein pinin pinin translation initiation factor IF-2 pinin pinin pinin uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 4
cit03040 Spliceosome 4
cit03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 3
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 8
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 7
sot03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 3
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae03082 ATP-dependent chromatin remodeling 3
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu03015 mRNA surveillance pathway 2
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106439985 106415643 103872307 103843175 838086 107939223 107928887 102625418 100801958 100801229 100245237 7478153 7470527 11421161 101248146 102599072 107803145 107768853 4333834 100283191 100191788 123095811 123087161 123082082 123447339 8063414 100834865 66054573
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