ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106347577	transcription termination factor MTERF5, chloroplastic
bna-r.1	106369182	transcription termination factor MTERF5, chloroplastic
bra-r.6	103871923	transcription termination factor MTERF5, chloroplastic
ath-u.5	MDA1	Mitochondrial transcription termination factor family protein
ghi-r.1	107913931	transcription termination factor MTERF5, chloroplastic
ghi-r.1	107897236	transcription termination factor MTERF5, chloroplastic
cit-r.1	102620729	transcription termination factor MTERF5, chloroplastic
gma-u.5	100816032	transcription termination factor MTERF5, chloroplastic-like
gma-u.5	100781900	transcription termination factor MTERF5, chloroplastic
gma-u.5	100775277	transcription termination factor MTERF5, chloroplastic
vvi-u.5	100262724	transcription termination factor MTERF5, chloroplastic
ppo-u.5	18107251	transcription termination factor MTERF5, chloroplastic
mtr-u.5	11420042	transcription termination factor MTERF5, chloroplastic
sly-u.5	101247175	transcription termination factor MTERF5, chloroplastic
sot-r.1	102599415	uncharacterized LOC102599415
nta-r.1	107813289	transcription termination factor MTERF5, chloroplastic
nta-r.1	107793940	transcription termination factor MTERF5, chloroplastic-like
zma-u.5	100284609	uncharacterized LOC100284609
tae-r.2	123144741	transcription termination factor MTERF5, chloroplastic
tae-r.2	123137393	transcription termination factor MTERF5, chloroplastic
tae-r.2	123127630	transcription termination factor MTERF5, chloroplastic
hvu-r.1	123403790	transcription termination factor MTERF5, chloroplastic-like
sbi-r.1	8072424	transcription termination factor MTERF5, chloroplastic
bdi-r.1	100829312	transcription termination factor MTERF5, chloroplastic
cre-r.1	CHLRE_14g611200v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0006355 [list] [network] regulation of DNA-templated transcription

(5322 genes)

IEA

GO CC

GO MF

GO:0003690 [list] [network] double-stranded DNA binding

(1590 genes)

IEA

Protein

XP_013642599.1 [sequence] [blastp]
XP_013642600.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, nucl 1, mito 1, plas 1, pero 1, golg 1, nucl_plas 1, golg_plas 1, mito_plas 1	(predict for XP_013642599.1)
cyto 7, nucl 1, plas 1, pero 1, golg 1, nucl_plas 1, golg_plas 1	(predict for XP_013642600.1)

Subcellular
localization
TargetP

chlo 3	(predict for XP_013642599.1)
other 4	(predict for XP_013642600.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106347577	bna-r.1 for 106369182	bra-r.6 for 103871923	ath-u.5 for MDA1	ghi-r.1 for 107913931	ghi-r.1 for 107897236	cit-r.1 for 102620729	gma-u.5 for 100816032	gma-u.5 for 100781900	gma-u.5 for 100775277	vvi-u.5 for 100262724	ppo-u.5 for 18107251	mtr-u.5 for 11420042	sly-u.5 for 101247175	sot-r.1 for 102599415	nta-r.1 for 107813289	nta-r.1 for 107793940	zma-u.5 for 100284609	tae-r.2 for 123144741	tae-r.2 for 123137393	tae-r.2 for 123127630	hvu-r.1 for 123403790	sbi-r.1 for 8072424	bdi-r.1 for 100829312	cre-r.1 for CHLRE_14g611200v5

Ortholog

Ortholog ID: 9573

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

zma

tae

hvu

sbi

bdi

cre

Symbol

MDA1

Function^*