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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106347874   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 
 bna-r.1   106375791   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 3 
 bna-r.1   106442330   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 3-like 
 bna-r.1   106422747   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1-like 
 bra-r.6   103873741   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 
 bra-r.6   103862587   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 3 
 ath-u.5   AT3G48390   MA3 domain-containing protein 
 ath-u.5   ECIP1   MA3 domain-containing protein 
 ath-u.5   AT5G63190   MA3 domain-containing protein 
 ghi-r.1   107953565   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 
 ghi-r.1   121232066   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 
 ghi-r.1   107949711   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 
 cit-r.1   102613560   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1-like 
 gma-u.5   100784244   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 
 gma-u.5   100809081   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 
 gma-u.5   100815729   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 
 vvi-u.5   100243296   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 
 ppo-u.5   7463081   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 
 ppo-u.5   7484443   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 
 mtr-u.5   11407964   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 
 sly-u.5   101255979   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 
 sly-u.5   101256273   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1-like 
 sot-r.1   102604303   uncharacterized LOC102604303 
 sot-r.1   102604631   uncharacterized LOC102604631 
 nta-r.1   107778398   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1-like 
 nta-r.1   107778399   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1-like 
 nta-r.1   107790693   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 
 osa-u.5   4344544   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 
 osa-u.5   4336196   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 
 zma-u.5   100501384   MA3 domain-containing protein 
 zma-u.5   100281524   uncharacterized LOC100281524 
 tae-r.2   123147500   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 
 tae-r.2   123169343   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 
 tae-r.2   123053677   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 
 hvu-r.1   123411468   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1-like 
 hvu-r.1   123427040   MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1-like 
 sbi-r.1   8066122   uncharacterized LOC8066122 
 sbi-r.1   8073676   uncharacterized LOC8073676 
 bdi-r.1   100842871   uncharacterized LOC100842871 
 bdi-r.1   100824453   programmed cell death protein 4 
 cre-r.1   CHLRE_09g415800v5   uncharacterized protein 

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Top 50 coexpressed genes to 106347874 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106347874 (bna-r.1 coexpression data)

CoexMap"106347874"


bnaLOC106347874 | Entrez gene ID : 106347874    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 1 3 1 2 1 2 2 3 2 2 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045892 [list] [network] negative regulation of DNA-templated transcription  (225 genes)  IEA  
GO CC
GO MF
Protein XP_013642939.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 2,  cysk_nucl 1,  plas 1,  cyto 1,  mito 1,  vacu 1,  E.R. 1,  golg_plas 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_013642939.2)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for XP_013642939.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106347874
bna-r.1
for
106375791
bna-r.1
for
106442330
bna-r.1
for
106422747
bra-r.6
for
103873741
bra-r.6
for
103862587
ath-u.5
for
AT3G48390
ath-u.5
for
ECIP1
ath-u.5
for
AT5G63190
ghi-r.1
for
107953565
ghi-r.1
for
121232066
ghi-r.1
for
107949711
cit-r.1
for
102613560
gma-u.5
for
100784244
gma-u.5
for
100809081
gma-u.5
for
100815729
vvi-u.5
for
100243296
ppo-u.5
for
7463081
ppo-u.5
for
7484443
mtr-u.5
for
11407964
sly-u.5
for
101255979
sly-u.5
for
101256273
sot-r.1
for
102604303
sot-r.1
for
102604631
nta-r.1
for
107778398
nta-r.1
for
107778399
nta-r.1
for
107790693
osa-u.5
for
4344544
osa-u.5
for
4336196
zma-u.5
for
100501384
zma-u.5
for
100281524
tae-r.2
for
123147500
tae-r.2
for
123169343
tae-r.2
for
123053677
hvu-r.1
for
123411468
hvu-r.1
for
123427040
sbi-r.1
for
8066122
sbi-r.1
for
8073676
bdi-r.1
for
100842871
bdi-r.1
for
100824453
cre-r.1
for
CHLRE_09g415800v5


Ortholog ID: 3941
Species bna bna bna bra bra ath ath ath ghi ghi ghi cit gma gma gma vvi ppo ppo mtr sly sly sot sot nta nta nta osa osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC106347874 LOC106375791 LOC106442330 LOC103873741 LOC103862587 AT3G48390 ECIP1 AT5G63190 LOC107953565 LOC107949711 LOC107886159 LOC102613560 LOC100784244 LOC100809081 LOC100815729 LOC100243296 LOC7463081 LOC7484443 LOC11407964 LOC101255979 LOC101256273 LOC102604303 LOC102604631 LOC107778398 LOC107778399 LOC107790693 LOC4344544 LOC4336196 LOC100501384 LOC100281524 LOC123169343 LOC123161383 LOC123189560 LOC123411468 LOC123427040 LOC8066122 LOC8073676 LOC100842871 LOC100824453 CHLRE_09g415800v5
Function* MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 3 MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 3-like MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 3 MA3 domain-containing protein MA3 domain-containing protein MA3 domain-containing protein MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1-like MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1-like uncharacterized LOC102604303 uncharacterized LOC102604631 MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1-like MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1-like MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 MA3 domain-containing protein uncharacterized LOC100281524 MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1-like MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1-like uncharacterized LOC8066122 uncharacterized LOC8073676 uncharacterized LOC100842871 programmed cell death protein 4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 8
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 6
ath00500 Starch and sucrose metabolism 3
ath00640 Propanoate metabolism 3
ath01210 2-Oxocarboxylic acid metabolism 3
ath00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
gma00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
gma00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00230 Purine metabolism 2
mtr01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 3
sly00280 Valine, leucine and isoleucine degradation 3
sly00052 Galactose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 4
sot04075 Plant hormone signal transduction 3
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 5
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04517 IgSF CAM signaling 2
nta04814 Motor proteins 2
nta00561 Glycerolipid metabolism 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04517 IgSF CAM signaling 2
nta04814 Motor proteins 2
nta00561 Glycerolipid metabolism 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04517 IgSF CAM signaling 2
nta04814 Motor proteins 2
nta00561 Glycerolipid metabolism 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 3
osa04626 Plant-pathogen interaction 2
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00280 Valine, leucine and isoleucine degradation 8
zma01210 2-Oxocarboxylic acid metabolism 4
zma03040 Spliceosome 3
zma00290 Valine, leucine and isoleucine biosynthesis 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 6
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00710 Carbon fixation by Calvin cycle 2
cre01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106347874 106375791 106442330 103873741 103862587 823997 828582 836440 107953565 107949711 107886159 102613560 100784244 100809081 100815729 100243296 7463081 7484443 11407964 101255979 101256273 102604303 102604631 107778398 107778399 107790693 4344544 4336196 100501384 100281524 123169343 123161383 123189560 123411468 123427040 8066122 8073676 100842871 100824453 5722371
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