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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106348098   E3 ubiquitin-protein ligase FANCL 
 ath-u.5   AT5G65740   zinc ion binding protein 
 ppo-u.5   7465550   uncharacterized LOC7465550 
 sly-u.5   101265515   uncharacterized LOC101265515 
 osa-u.5   112936009   uncharacterized LOC112936009 
 zma-u.5   100192745   ubiquitin ligase protein FANCL 

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Top 50 coexpressed genes to 106348098 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106348098 (bna-r.1 coexpression data)

CoexMap"106348098"


bnaLOC106348098 | Entrez gene ID : 106348098    
Species bna ath ppo sly osa zma gma tae vvi mtr bra nta cit sot ghi sbi cre hvu bdi
Paralog 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03460 [list] [network] Fanconi anemia pathway (105 genes)
bna04120 [list] [network] Ubiquitin mediated proteolysis (476 genes)
GO BP
GO:0006513 [list] [network] protein monoubiquitination  (10 genes)  IEA  
GO:0036297 [list] [network] interstrand cross-link repair  (26 genes)  IEA  
GO CC
GO:0043240 [list] [network] Fanconi anaemia nuclear complex  (12 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (605 genes)  IEA  
Protein XP_013643210.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  chlo 1  (predict for XP_013643210.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013643210.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106348098

.
ath-u.5
for
AT5G65740

.
ppo-u.5
for
7465550

.
sly-u.5
for
101265515

.
osa-u.5
for
112936009

.
zma-u.5
for
100192745

.


Ortholog ID: 11770
Species ath sly osa zma ppo tae hvu ghi ghi bna cre sbi sot cit bdi nta nta
Symbol AT5G65740 LOC101265515 LOC112936009 LOC100192745 LOC7465550 LOC123087016 LOC123447643 LOC107935245 LOC107950519 LOC106348098 CHLRE_03g204801v5 LOC8059969 LOC102601597 LOC102612512 LOC100839769 LOC107824409 LOC107795080
Function* zinc ion binding protein uncharacterized LOC101265515 uncharacterized LOC112936009 ubiquitin ligase protein FANCL uncharacterized LOC7465550 E3 ubiquitin-protein ligase FANCL E3 ubiquitin-protein ligase FANCL E3 ubiquitin-protein ligase FANCL E3 ubiquitin-protein ligase FANCL E3 ubiquitin-protein ligase FANCL uncharacterized protein uncharacterized LOC8059969 E3 ubiquitin-protein ligase FANCL uncharacterized LOC102612512 uncharacterized LOC100839769 uncharacterized LOC107824409 uncharacterized LOC107795080
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 3
sly03420 Nucleotide excision repair 2
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03460 Fanconi anemia pathway 2
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 6
ghi03460 Fanconi anemia pathway 3
ghi04120 Ubiquitin mediated proteolysis 2
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 6
ghi03460 Fanconi anemia pathway 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi03430 Mismatch repair 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03015 mRNA surveillance pathway 2
sbi03083 Polycomb repressive complex 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 3
nta03460 Fanconi anemia pathway 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
nta04120 Ubiquitin mediated proteolysis 2
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836703 101265515 112936009 100192745 7465550 123087016 123447643 107935245 107950519 106348098 5724939 8059969 102601597 102612512 100839769 107824409 107795080
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