ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106349162	V-type proton ATPase subunit d1-like
bna-r.1	106421628	V-type proton ATPase subunit d1-like
bna-r.1	106402094	V-type proton ATPase subunit d1
bna-r.1	106396293	V-type proton ATPase subunit d1
bra-r.6	103854189	V-type proton ATPase subunit d1
bra-r.6	103875137	V-type proton ATPase subunit d1
bra-r.6	103837028	V-type proton ATPase subunit d1
ath-u.5	AT3G28710	ATPase, V0/A0 complex, subunit C/D
ath-u.5	AT3G28715	ATPase, V0/A0 complex, subunit C/D
ghi-r.1	107958609	V-type proton ATPase subunit d2
ghi-r.1	107955546	V-type proton ATPase subunit d2
ghi-r.1	107892365	V-type proton ATPase subunit d2
cit-r.1	102623564	V-type proton ATPase subunit d2
gma-u.5	100780773	V-type proton ATPase subunit d2-like
gma-u.5	100800553	V-type proton ATPase subunit d2
vvi-u.5	100244110	V-type proton ATPase subunit d2-like
ppo-u.5	7495957	V-type proton ATPase subunit d2
mtr-u.5	25497487	V-type proton ATPase subunit d1
mtr-u.5	11410508	V-type proton ATPase subunit d2
sly-u.5	101264386	V-type proton ATPase subunit d2
sot-r.1	102595807	V-type proton ATPase subunit d2
nta-r.1	107763601	V-type proton ATPase subunit d2
nta-r.1	107769027	V-type proton ATPase subunit d2
nta-r.1	107803995	V-type proton ATPase subunit d2-like
osa-u.5	4327660	probable V-type proton ATPase subunit d
zma-u.5	100280083	uncharacterized LOC100280083
tae-r.2	123061368	probable V-type proton ATPase subunit d
tae-r.2	123070014	probable V-type proton ATPase subunit d
tae-r.2	100146098	probable V-type proton ATPase subunit d
hvu-r.1	123443779	probable V-type proton ATPase subunit d
sbi-r.1	8078231	probable V-type proton ATPase subunit d
bdi-r.1	100827887	probable V-type proton ATPase subunit d
cre-r.1	CHLRE_03g176250v5	uncharacterized protein

Top 50 coexpressed genes to 106349162 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 106349162 (bna-r.1 coexpression data)

CoexMap"106349162"

[Cytoscape]

Annotation

functional annotation

KEGG

bna00190 [list] [network] Oxidative phosphorylation (589 genes)

bna04142 [list] [network] Lysosome (242 genes)

bna04145 [list] [network] Phagosome (326 genes)

GO BP

GO:0007035 [list] [network] vacuolar acidification	(24 genes)	IEA
GO:0007034 [list] [network] vacuolar transport	(201 genes)	IEA
GO:1902600 [list] [network] proton transmembrane transport	(386 genes)	IEA

GO CC

GO:0016471 [list] [network] vacuolar proton-transporting V-type ATPase complex	(49 genes)	IEA
GO:0033179 [list] [network] proton-transporting V-type ATPase, V0 domain	(55 genes)	IEA

GO MF

GO:0046961 [list] [network] proton-transporting ATPase activity, rotational mechanism

(117 genes)

IEA

Protein

XP_013644541.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, nucl 3, cysk 1, nucl_plas 1

(predict for XP_013644541.1)

Subcellular
localization
TargetP

other 5

(predict for XP_013644541.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106349162	bna-r.1 for 106421628	bna-r.1 for 106402094	bna-r.1 for 106396293	bra-r.6 for 103854189	bra-r.6 for 103875137	bra-r.6 for 103837028	ath-u.5 for AT3G28710	ath-u.5 for AT3G28715	ghi-r.1 for 107958609	ghi-r.1 for 107955546	ghi-r.1 for 107892365	cit-r.1 for 102623564	gma-u.5 for 100780773	gma-u.5 for 100800553	vvi-u.5 for 100244110	ppo-u.5 for 7495957	mtr-u.5 for 25497487	mtr-u.5 for 11410508	sly-u.5 for 101264386	sot-r.1 for 102595807	nta-r.1 for 107763601	nta-r.1 for 107769027	nta-r.1 for 107803995	osa-u.5 for 4327660	zma-u.5 for 100280083	tae-r.2 for 123061368	tae-r.2 for 123070014	tae-r.2 for 100146098	hvu-r.1 for 123443779	sbi-r.1 for 8078231	bdi-r.1 for 100827887	cre-r.1 for CHLRE_03g176250v5

Ortholog

Ortholog ID: 5320

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

V-type proton ATPase subunit d1

V-type proton ATPase subunit d1-like

V-type proton ATPase subunit d1

ATPase, V0/A0 complex, subunit C/D

V-type proton ATPase subunit d2

V-type proton ATPase subunit d2-like

V-type proton ATPase subunit d2

V-type proton ATPase subunit d2-like

V-type proton ATPase subunit d2

V-type proton ATPase subunit d1

V-type proton ATPase subunit d2

V-type proton ATPase subunit d2-like

probable V-type proton ATPase subunit d

uncharacterized LOC100280083

probable V-type proton ATPase subunit d

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	8
bna04145	Phagosome	8
bna04142	Lysosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	8
bna04145	Phagosome	8
bna04142	Lysosome	7
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	12
bna04145	Phagosome	12
bna04142	Lysosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	11
bra04145	Phagosome	11
bra04142	Lysosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	11
bra04145	Phagosome	11
bra04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	10
bra04145	Phagosome	10
bra04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	10
ath04145	Phagosome	8
ath04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	12
ath04145	Phagosome	12
ath04142	Lysosome	4
ath00053	Ascorbate and aldarate metabolism	2
ath00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	4
ghi04142	Lysosome	4
ghi04145	Phagosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	4
ghi04142	Lysosome	4
ghi04145	Phagosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	4
ghi04142	Lysosome	4
ghi04145	Phagosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03050	Proteasome	5
cit01230	Biosynthesis of amino acids	3
cit00010	Glycolysis / Gluconeogenesis	2
cit01200	Carbon metabolism	2
cit00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	6
gma04145	Phagosome	6
gma04144	Endocytosis	3
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	11
gma04145	Phagosome	10
gma04142	Lysosome	2
gma00220	Arginine biosynthesis	2
gma00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04142	Lysosome	5
vvi04144	Endocytosis	3
vvi00190	Oxidative phosphorylation	2
vvi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	5
ppo00190	Oxidative phosphorylation	4
ppo04142	Lysosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	8
mtr04145	Phagosome	6
mtr04142	Lysosome	3
mtr01200	Carbon metabolism	3
mtr00920	Sulfur metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	16
mtr04145	Phagosome	13
mtr04142	Lysosome	7
mtr01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	6
sly04145	Phagosome	4
sly01200	Carbon metabolism	3
sly04142	Lysosome	2
sly00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	4
sot04145	Phagosome	3
sot04142	Lysosome	2
sot04016	MAPK signaling pathway - plant	2
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	18
nta04145	Phagosome	18
nta04142	Lysosome	6
nta00564	Glycerophospholipid metabolism	2
nta00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	4
nta01240	Biosynthesis of cofactors	3
nta00190	Oxidative phosphorylation	3
nta00270	Cysteine and methionine metabolism	2
nta03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	2
nta00270	Cysteine and methionine metabolism	2
nta03015	mRNA surveillance pathway	2
nta04136	Autophagy - other	2
nta04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	12
osa04145	Phagosome	10
osa04142	Lysosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	13
zma04145	Phagosome	13
zma04142	Lysosome	5
zma00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	9
tae04145	Phagosome	9
tae04142	Lysosome	7
tae04075	Plant hormone signal transduction	3
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	9
tae04145	Phagosome	9
tae04144	Endocytosis	6
tae04142	Lysosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	10
tae04145	Phagosome	10
tae04142	Lysosome	7
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03050	Proteasome	2
hvu04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	15
sbi04145	Phagosome	14
sbi04142	Lysosome	6
sbi00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	6
bdi04145	Phagosome	6
bdi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00190	Oxidative phosphorylation	9
cre04145	Phagosome	9
cre04142	Lysosome	5

Expression

Expression pattern

Entrez Gene ID^*

106402094

106371132

125596424

103854189

103875137

103837028

822502

822503

107958609

107955546

107892336

102623564

100780773

100800553

100244110

7495957

25497487

11410508

101264386

102595807

107763601

107769027

107803995

4327660

100280083

123061368

123070014

100146098

123443779

8078231

100827887

5728851

The preparation time of this page was 0.1 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	2	3	1	2	1	1	2	1	1	3	1	1	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106349162 (bna-r.1 coexpression data)

Top 50 enrichment test to 106349162 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**