ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106349632	RNA-binding protein cabeza
bna-r.1	BNAA06G27750D	RNA-binding protein involved in heterochromatin assembly dri1
bna-r.1	106387497	transcription initiation factor TFIID subunit 15b-like
bna-r.1	106404094	transcription initiation factor TFIID subunit 15
bra-r.6	103840565	RNA-binding protein cabeza
bra-r.6	103854748	uncharacterized RNA-binding protein C17H9.04c-like
bra-r.6	103859636	transcription initiation factor TFIID subunit 15-like
ath-u.5	AT3G15680	Ran BP2/NZF zinc finger-like superfamily protein
ath-u.5	AT5G25490	Ran BP2/NZF zinc finger-like superfamily protein
ghi-r.1	107942875	zinc finger Ran-binding domain-containing protein 2
ghi-r.1	121229345	zinc finger Ran-binding domain-containing protein 2
ghi-r.1	121218650	zinc finger Ran-binding domain-containing protein 2
cit-r.1	102612282	uncharacterized LOC102612282
cit-r.1	102613403	transcription initiation factor TFIID subunit 15
gma-u.5	100811107	transcription initiation factor TFIID subunit 15
gma-u.5	100799240	TATA-binding protein-associated factor 2N
gma-u.5	100527535	uncharacterized LOC100527535
vvi-u.5	100248007	uncharacterized LOC100248007
vvi-u.5	100268075	uncharacterized LOC100268075
ppo-u.5	7490961	uncharacterized LOC7490961
ppo-u.5	7462978	uncharacterized LOC7462978
ppo-u.5	7475713	uncharacterized LOC7475713
mtr-u.5	25491332	zinc finger Ran-binding domain-containing protein 2
mtr-u.5	11431968	uncharacterized RNA-binding protein C17H9.04c
sly-u.5	101265154	RNA-binding protein involved in heterochromatin assembly dri1
sot-r.1	102594174	uncharacterized RNA-binding protein C17H9.04c
nta-r.1	107763007	RNA-binding protein involved in heterochromatin assembly dri1
nta-r.1	107812132	RNA-binding protein involved in heterochromatin assembly dri1
osa-u.5	4340075	RNA-binding protein involved in heterochromatin assembly dri1
osa-u.5	4328666	uncharacterized LOC4328666
zma-u.5	100194201	uncharacterized LOC100194201
zma-u.5	606475	uncharacterized LOC606475
zma-u.5	100277313	uncharacterized LOC100277313
tae-r.2	123164270	zinc finger Ran-binding domain-containing protein 2
tae-r.2	123149383	uncharacterized RNA-binding protein C17H9.04c
tae-r.2	123136930	RNA-binding protein cabeza
hvu-r.1	123403388	RNA-binding protein cabeza
hvu-r.1	123407636	uncharacterized RNA-binding protein C17H9.04c-like
sbi-r.1	8068430	uncharacterized RNA-binding protein C17H9.04c
sbi-r.1	110434870	RNA-binding protein cabeza
bdi-r.1	100843780	TATA-binding protein-associated factor 2N
bdi-r.1	100824932	uncharacterized RNA-binding protein C17H9.04c
cre-r.1	CHLRE_01g034380v5	uncharacterized protein

Top 50 coexpressed genes to 106349632 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 106349632 (bna-r.1 coexpression data)

CoexMap"106349632"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005737 [list] [network] cytoplasm

(16489 genes)

IEA

GO MF

GO:0003729 [list] [network] mRNA binding

(918 genes)

IEA

Protein

XP_013645077.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 4, cyto_nucl 4

(predict for XP_013645077.1)

Subcellular
localization
TargetP

mito 5

(predict for XP_013645077.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106349632	bna-r.1 for BNAA06G27750D	bna-r.1 for 106387497	bna-r.1 for 106404094	bra-r.6 for 103840565	bra-r.6 for 103854748	bra-r.6 for 103859636	ath-u.5 for AT3G15680	ath-u.5 for AT5G25490	ghi-r.1 for 107942875	ghi-r.1 for 121229345	ghi-r.1 for 121218650	cit-r.1 for 102612282	cit-r.1 for 102613403	gma-u.5 for 100811107	gma-u.5 for 100799240	gma-u.5 for 100527535	vvi-u.5 for 100248007	vvi-u.5 for 100268075	ppo-u.5 for 7490961	ppo-u.5 for 7462978	ppo-u.5 for 7475713	mtr-u.5 for 25491332	mtr-u.5 for 11431968	sly-u.5 for 101265154	sot-r.1 for 102594174	nta-r.1 for 107763007	nta-r.1 for 107812132	osa-u.5 for 4340075	osa-u.5 for 4328666	zma-u.5 for 100194201	zma-u.5 for 606475	zma-u.5 for 100277313	tae-r.2 for 123164270	tae-r.2 for 123149383	tae-r.2 for 123136930	hvu-r.1 for 123403388	hvu-r.1 for 123407636	sbi-r.1 for 8068430	sbi-r.1 for 110434870	bdi-r.1 for 100843780	bdi-r.1 for 100824932	cre-r.1 for CHLRE_01g034380v5

Ortholog

Ortholog ID: 2903

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

RNA-binding protein cabeza

transcription initiation factor TFIID subunit 15b-like

RNA-binding protein cabeza

uncharacterized RNA-binding protein C17H9.04c-like

uncharacterized RNA-binding protein C17H9.04c

Ran BP2/NZF zinc finger-like superfamily protein

zinc finger Ran-binding domain-containing protein 2

uncharacterized LOC102612282

transcription initiation factor TFIID subunit 15

TATA-binding protein-associated factor 2N

zinc finger Ran-binding domain-containing protein

uncharacterized LOC100248007

uncharacterized LOC100268075

uncharacterized LOC7462978

uncharacterized LOC7475713

uncharacterized LOC7495765

zinc finger Ran-binding domain-containing protein 2

uncharacterized RNA-binding protein C17H9.04c

RNA-binding protein involved in heterochromatin assembly dri1

uncharacterized RNA-binding protein C17H9.04c

RNA-binding protein involved in heterochromatin assembly dri1

uncharacterized LOC4328666

uncharacterized LOC100194201

uncharacterized LOC606475

uncharacterized LOC100277313

zinc finger Ran-binding domain-containing protein 2

uncharacterized RNA-binding protein C17H9.04c

RNA-binding protein EWS

RNA-binding protein cabeza

uncharacterized RNA-binding protein C17H9.04c-like

uncharacterized RNA-binding protein C17H9.04c

RNA-binding protein cabeza

TATA-binding protein-associated factor 2N

uncharacterized RNA-binding protein C17H9.04c

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04145	Phagosome	2
vvi04517	IgSF CAM signaling	2
vvi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	6
osa03013	Nucleocytoplasmic transport	3
osa03015	mRNA surveillance pathway	3
osa03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00760	Nicotinate and nicotinamide metabolism	3
tae01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04136	Autophagy - other	2

Expression

Expression pattern

Entrez Gene ID^*

106349632

106387497

103840565

103854748

103874408

820811

832624

121229345

121218650

107937363

102612282

102613403

100811107

100799240

100499847

100248007

100268075

7462978

7475713

7495765

25491332

11431968

101265154

102594174

107763007

107812132

4340075

4328666

100194201

606475

100277313

123164270

123149383

123142553

123403388

123407636

8068430

110434870

100843780

100824932

66052090

The preparation time of this page was 0.3 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	2	3	2	3	2	3	2	1	1	2	2	3	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106349632 (bna-r.1 coexpression data)

Top 50 enrichment test to 106349632 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**