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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106348098   E3 ubiquitin-protein ligase FANCL 
 ath-u.5   AT5G65740   zinc ion binding protein 
 ghi-r.1   107935245   E3 ubiquitin-protein ligase FANCL 
 ghi-r.1   107950519   E3 ubiquitin-protein ligase FANCL 
 cit-r.1   102612512   uncharacterized LOC102612512 
 ppo-u.5   7465550   uncharacterized LOC7465550 
 sly-u.5   101265515   uncharacterized LOC101265515 
 sot-r.1   102601597   E3 ubiquitin-protein ligase FANCL 
 nta-r.1   107795080   uncharacterized LOC107795080 
 nta-r.1   107824409   uncharacterized LOC107824409 
 osa-u.5   112936009   uncharacterized LOC112936009 
 zma-u.5   100192745   ubiquitin ligase protein FANCL 
 tae-r.2   123087016   E3 ubiquitin-protein ligase FANCL 
 tae-r.2   123095976   E3 ubiquitin-protein ligase FANCL 
 hvu-r.1   123447643   E3 ubiquitin-protein ligase FANCL 
 sbi-r.1   8059969   uncharacterized LOC8059969 
 bdi-r.1   100839769   uncharacterized LOC100839769 
 cre-r.1   CHLRE_03g204801v5   uncharacterized protein 

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Top 50 coexpressed genes to 106348098 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106348098 (bna-r.1 coexpression data)

CoexMap"106351948"


bnaLOC106351948 | Entrez gene ID : 106351948    
Species bna ath ghi cit ppo sly sot nta osa zma tae hvu sbi bdi cre bra mtr vvi gma
Paralog 1 1 2 1 1 1 1 2 1 1 2 1 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03460 [list] [network] Fanconi anemia pathway (105 genes)
bna04120 [list] [network] Ubiquitin mediated proteolysis (476 genes)
GO BP
GO:0006513 [list] [network] protein monoubiquitination  (10 genes)  IEA  
GO:0036297 [list] [network] interstrand cross-link repair  (26 genes)  IEA  
GO CC
GO:0043240 [list] [network] Fanconi anaemia nuclear complex  (12 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (605 genes)  IEA  
Protein XP_013647110.2 [sequence] [blastp]
XP_048590947.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto_nucl 5,  nucl 4,  cyto 4  (predict for XP_013647110.2)
nucl 4,  cyto 4,  plas 1,  golg_plas 1  (predict for XP_048590947.1)
Subcellular
localization
TargetP
other 7  (predict for XP_013647110.2)
other 8  (predict for XP_048590947.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106348098
ath-u.5
for
AT5G65740
ghi-r.1
for
107935245
ghi-r.1
for
107950519
cit-r.1
for
102612512
ppo-u.5
for
7465550
sly-u.5
for
101265515
sot-r.1
for
102601597
nta-r.1
for
107795080
nta-r.1
for
107824409
osa-u.5
for
112936009
zma-u.5
for
100192745
tae-r.2
for
123087016
tae-r.2
for
123095976
hvu-r.1
for
123447643
sbi-r.1
for
8059969
bdi-r.1
for
100839769
cre-r.1
for
CHLRE_03g204801v5


Ortholog ID: 11770
Species bna ath ghi ghi cit ppo sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC106348098 AT5G65740 LOC107935245 LOC107950519 LOC102612512 LOC7465550 LOC101265515 LOC102601597 LOC107795080 LOC107824409 LOC112936009 LOC100192745 LOC123087016 LOC123095976 LOC123447643 LOC8059969 LOC100839769 CHLRE_03g204801v5
Function* E3 ubiquitin-protein ligase FANCL zinc ion binding protein E3 ubiquitin-protein ligase FANCL E3 ubiquitin-protein ligase FANCL uncharacterized LOC102612512 uncharacterized LOC7465550 uncharacterized LOC101265515 E3 ubiquitin-protein ligase FANCL uncharacterized LOC107795080 uncharacterized LOC107824409 uncharacterized LOC112936009 ubiquitin ligase protein FANCL E3 ubiquitin-protein ligase FANCL E3 ubiquitin-protein ligase FANCL E3 ubiquitin-protein ligase FANCL uncharacterized LOC8059969 uncharacterized LOC100839769 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 6
ghi03460 Fanconi anemia pathway 3
ghi04120 Ubiquitin mediated proteolysis 2
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 6
ghi03460 Fanconi anemia pathway 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi03430 Mismatch repair 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 3
sly03420 Nucleotide excision repair 2
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
nta04120 Ubiquitin mediated proteolysis 2
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 3
nta03460 Fanconi anemia pathway 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03460 Fanconi anemia pathway 2
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03460 Fanconi anemia pathway 2
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03015 mRNA surveillance pathway 2
sbi03083 Polycomb repressive complex 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106348098 836703 107935245 107950519 102612512 7465550 101265515 102601597 107795080 107824409 112936009 100192745 123087016 123095976 123447643 8059969 100839769 5724939
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