ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106353032	senescence associated gene 20-like
bna-r.1	125580358	senescence associated gene 20-like
bna-r.1	125587907	senescence associated gene 20-like
bna-r.1	106352490	senescence associated gene 20-like
bra-r.6	103870413	senescence associated gene 20
bra-r.6	103847181	senescence associated gene 20
bra-r.6	103859369	senescence associated gene 20-like
ath-u.5	SAG20	senescence associated gene 20
ghi-r.1	121207910	wound-induced protein 1
ghi-r.1	107900581	wound-induced protein 1
ghi-r.1	107936366	wound-induced protein 1
cit-r.1	102629605	senescence associated gene 20
vvi-u.5	100853125	senescence associated gene 20
ppo-u.5	7472455	wound-induced protein 1
ppo-u.5	112328974	uncharacterized LOC112328974
mtr-u.5	11406534	senescence associated gene 20
mtr-u.5	11415899	senescence associated gene 20
sly-u.5	101265932	wound-induced protein 1
sly-u.5	101251891	wound-induced protein 1
sot-r.1	102602960	wound-induced protein 1
nta-r.1	107795502	uncharacterized LOC107795502
osa-u.5	107277789	senescence associated gene 20
osa-u.5	4344371	senescence associated gene 20
osa-u.5	4332560	wound-induced protein 1
zma-u.5	109617026	uncharacterized LOC109617026
zma-u.5	111064652	uncharacterized LOC111064652
tae-r.2	123051440	wound-induced protein 1
tae-r.2	123040522	senescence associated gene 20
tae-r.2	123043571	senescence associated gene 20
hvu-r.1	123424634	senescence associated gene 20-like
hvu-r.1	123446576	senescence associated gene 20-like
hvu-r.1	123424635	senescence associated gene 20-like
sbi-r.1	8084018	uncharacterized LOC8084018
sbi-r.1	8061318	uncharacterized LOC8061318
sbi-r.1	8084017	wound-induced protein 1
bdi-r.1	100834985	senescence associated gene 20

Top 50 coexpressed genes to 106353032 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 106353032 (bna-r.1 coexpression data)

CoexMap"106353032"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_013648161.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, extr 1, mito 1, E.R._vacu 1

(predict for XP_013648161.1)

Subcellular
localization
TargetP

scret 6, other 3

(predict for XP_013648161.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106353032	bna-r.1 for 125580358	bna-r.1 for 125587907	bna-r.1 for 106352490	bra-r.6 for 103870413	bra-r.6 for 103847181	bra-r.6 for 103859369	ath-u.5 for SAG20	ghi-r.1 for 121207910	ghi-r.1 for 107900581	ghi-r.1 for 107936366	cit-r.1 for 102629605	vvi-u.5 for 100853125	ppo-u.5 for 7472455	ppo-u.5 for 112328974	mtr-u.5 for 11406534	mtr-u.5 for 11415899	sly-u.5 for 101265932	sly-u.5 for 101251891	sot-r.1 for 102602960	nta-r.1 for 107795502	osa-u.5 for 107277789	osa-u.5 for 4344371	osa-u.5 for 4332560	zma-u.5 for 109617026	zma-u.5 for 111064652	tae-r.2 for 123051440	tae-r.2 for 123040522	tae-r.2 for 123043571	hvu-r.1 for 123424634	hvu-r.1 for 123446576	hvu-r.1 for 123424635	sbi-r.1 for 8084018	sbi-r.1 for 8061318	sbi-r.1 for 8084017	bdi-r.1 for 100834985

Ortholog

Ortholog ID: 2862

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

SAG20

WI12

Function^*

senescence associated gene 20-like

senescence associated gene 20

senescence associated gene 20-like

senescence associated gene 20

wound-induced protein 1

senescence associated gene 20

wound-inducible protein 12

senescence associated gene 20

wound-induced protein 1

uncharacterized LOC112328974

senescence associated gene 20

wound-induced protein 1

uncharacterized LOC107795502

senescence associated gene 20

wound-induced protein 1

uncharacterized LOC109617026

uncharacterized LOC111064652

senescence associated gene 20

senescence associated gene 20-like

uncharacterized LOC8084018

uncharacterized LOC8061318

wound-induced protein 1

senescence associated gene 20

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01230	Biosynthesis of amino acids	2
bra04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	2
ath04626	Plant-pathogen interaction	2
ath00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00052	Galactose metabolism	2
ghi00500	Starch and sucrose metabolism	2
ghi04016	MAPK signaling pathway - plant	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	2
gma04075	Plant hormone signal transduction	2
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	8
sly04075	Plant hormone signal transduction	8
sly00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	2
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	11
sot04075	Plant hormone signal transduction	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	4
nta04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04016	MAPK signaling pathway - plant	2
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00240	Pyrimidine metabolism	2
zma01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00240	Pyrimidine metabolism	2
hvu00760	Nicotinate and nicotinamide metabolism	2
hvu01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	5
sbi04141	Protein processing in endoplasmic reticulum	5
sbi04144	Endocytosis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	5
sbi03040	Spliceosome	4
sbi04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04016	MAPK signaling pathway - plant	3
bdi00904	Diterpenoid biosynthesis	2
bdi04075	Plant hormone signal transduction	2
bdi04626	Plant-pathogen interaction	2

Expression

Expression pattern

Entrez Gene ID^*

125580358

106352490

106385752

103870413

103847181

103859369

2745879

121207910

107936366

107933252

102629605

100778637

100853125

7472455

112328974

11406534

11415899

101265932

101251891

102602960

107795502

107277789

4344371

4332560

109617026

111064652

123040522

123085625

123099979

123424634

123446576

123424635

8084018

8061318

8084017

100834985

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Species	bna	bra	ath	ghi	cit	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre	gma
Paralog	4	3	1	3	1	1	2	2	2	1	1	3	2	3	3	3	1	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106353032 (bna-r.1 coexpression data)

Top 50 enrichment test to 106353032 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**