ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106353269	photosystem I chlorophyll a/b-binding protein 2, chloroplastic-like
bna-r.1	125591199	photosystem I chlorophyll a/b-binding protein 2, chloroplastic-like
bna-r.1	106396788	photosystem I chlorophyll a/b-binding protein 2, chloroplastic
bna-r.1	106432728	photosystem I chlorophyll a/b-binding protein 2, chloroplastic
bra-r.6	103830300	photosystem I chlorophyll a/b-binding protein 2, chloroplastic
bra-r.6	103862822	photosystem I chlorophyll a/b-binding protein 2, chloroplastic
ath-u.5	LHCA2	photosystem I light harvesting complex protein
ghi-r.1	107946268	chlorophyll a-b binding protein 7, chloroplastic
ghi-r.1	107922548	chlorophyll a-b binding protein 7, chloroplastic
ghi-r.1	107916739	chlorophyll a-b binding protein 7, chloroplastic
cit-r.1	102608150	chlorophyll a-b binding protein, chloroplastic
gma-u.5	100802138	chlorophyll a-b binding protein 7, chloroplastic
gma-u.5	100794944	chlorophyll a-b binding protein 7, chloroplastic-like
gma-u.5	100784089	chlorophyll a-b binding protein, chloroplastic
vvi-u.5	100266036	chlorophyll a-b binding protein, chloroplastic
ppo-u.5	7482788	chlorophyll a-b binding protein 7, chloroplastic
mtr-u.5	25500581	chlorophyll a-b binding protein 7, chloroplastic
sly-u.5	CAB7	chlorophyll a-b binding protein 7, chloroplastic-like
sot-r.1	102594790	chlorophyll a-b binding protein 7, chloroplastic
nta-r.1	107758987	chlorophyll a-b binding protein, chloroplastic-like
nta-r.1	107796964	chlorophyll a-b binding protein, chloroplastic
nta-r.1	107831953	chlorophyll a-b binding protein, chloroplastic
osa-u.5	4343709	photosystem I chlorophyll a/b-binding protein 2, chloroplastic
zma-u.5	100191715	chlorophyll a-b binding protein
zma-u.5	100282512	chlorophyll a-b binding protein
tae-r.2	123188102	chlorophyll a-b binding protein 7, chloroplastic
tae-r.2	123052305	chlorophyll a-b binding protein 7, chloroplastic
tae-r.2	123044442	chlorophyll a-b binding protein 7, chloroplastic
hvu-r.1	123425578	chlorophyll a-b binding protein 7, chloroplastic
sbi-r.1	110432431	photosystem I chlorophyll a/b-binding protein 2, chloroplastic
bdi-r.1	100843944	chlorophyll a-b binding protein 7, chloroplastic

Top 50 coexpressed genes to 106353269 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 106353269 (bna-r.1 coexpression data)

CoexMap"106353269"

[Cytoscape]

Annotation

functional annotation

KEGG

bna00196 [list] [network] Photosynthesis - antenna proteins (65 genes)

GO BP

GO:0009768 [list] [network] photosynthesis, light harvesting in photosystem I	(68 genes)	IEA
GO:0009416 [list] [network] response to light stimulus	(379 genes)	IEA

GO CC

GO:0016020 [list] [network] membrane

(9970 genes)

IEA

GO MF

Protein

XP_013648443.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9

(predict for XP_013648443.1)

Subcellular
localization
TargetP

chlo 9

(predict for XP_013648443.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106353269	bna-r.1 for 125591199	bna-r.1 for 106396788	bna-r.1 for 106432728	bra-r.6 for 103830300	bra-r.6 for 103862822	ath-u.5 for LHCA2	ghi-r.1 for 107946268	ghi-r.1 for 107922548	ghi-r.1 for 107916739	cit-r.1 for 102608150	gma-u.5 for 100802138	gma-u.5 for 100794944	gma-u.5 for 100784089	vvi-u.5 for 100266036	ppo-u.5 for 7482788	mtr-u.5 for 25500581	sly-u.5 for CAB7	sot-r.1 for 102594790	nta-r.1 for 107758987	nta-r.1 for 107796964	nta-r.1 for 107831953	osa-u.5 for 4343709	zma-u.5 for 100191715	zma-u.5 for 100282512	tae-r.2 for 123188102	tae-r.2 for 123052305	tae-r.2 for 123044442	hvu-r.1 for 123425578	sbi-r.1 for 110432431	bdi-r.1 for 100843944

Ortholog

Ortholog ID: 6293

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

LHCA2

CAB7

Function^*

photosystem I chlorophyll a/b-binding protein 2, chloroplastic-like

photosystem I chlorophyll a/b-binding protein 2, chloroplastic

photosystem I light harvesting complex protein