ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	BNAA07G34590D	uncharacterized BNAA07G34590D
bna-r.1	BNAC06G20180D	uncharacterized BNAC06G20180D
bna-r.1	106381535	uncharacterized LOC106381535
bna-r.1	106381455	uncharacterized LOC106381455
bra-r.6	103830501	uncharacterized LOC103830501
bra-r.6	103853160	uncharacterized LOC103853160
ath-u.5	AT1G16690	Enhancer of polycomb-like transcription factor protein
ath-u.5	AT1G79020	Enhancer of polycomb-like transcription factor protein
ghi-r.1	107925297	uncharacterized LOC107925297
ghi-r.1	107930431	uncharacterized LOC107930431
cit-r.1	102612653	uncharacterized LOC102612653
gma-u.5	100795526	enhancer of polycomb homolog 2
gma-u.5	100811280	enhancer of polycomb homolog 2
vvi-u.5	100264813	uncharacterized LOC100264813
ppo-u.5	18104729	enhancer of polycomb-like protein 1
mtr-u.5	25501886	uncharacterized LOC25501886
sly-u.5	101258428	uncharacterized LOC101258428
sly-u.5	101253542	uncharacterized LOC101253542
sot-r.1	102600769	enhancer of polycomb-like protein 1
sot-r.1	102604592	uncharacterized LOC102604592
nta-r.1	107801921	uncharacterized LOC107801921
nta-r.1	107774443	uncharacterized LOC107774443
nta-r.1	107763977	uncharacterized LOC107763977
osa-u.5	4345317	uncharacterized LOC4345317
osa-u.5	4346622	uncharacterized LOC4346622
zma-u.5	103647333	uncharacterized LOC103647333
zma-u.5	541956	enhancer of polycomb-like protein101
tae-r.2	123121049	uncharacterized LOC123121049
tae-r.2	123103432	uncharacterized LOC123103432
tae-r.2	123111629	uncharacterized LOC123111629
hvu-r.1	123452687	uncharacterized LOC123452687
sbi-r.1	8062061	uncharacterized LOC8062061
bdi-r.1	100832343	enhancer of polycomb homolog 2
bdi-r.1	100832190	uncharacterized LOC100832190
cre-r.1	CHLRE_03g196400v5	uncharacterized protein

Top 50 coexpressed genes to BNAA07G34590D (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to BNAA07G34590D (bna-r.1 coexpression data)

CoexMap"106354654"

[Cytoscape]

Annotation

functional annotation

KEGG

bna03082 [list] [network] ATP-dependent chromatin remodeling (198 genes)

GO BP

GO:0006357 [list] [network] regulation of transcription by RNA polymerase II

(1371 genes)

IEA

GO CC

GO:0032777 [list] [network] piccolo histone acetyltransferase complex

(12 genes)

IEA

GO MF

Protein

XP_013650103.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, chlo 4, mito 1, plas 1, mito_plas 1

(predict for XP_013650103.1)

Subcellular
localization
TargetP

mito 5, other 4

(predict for XP_013650103.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for BNAA07G34590D	bna-r.1 for BNAC06G20180D	bna-r.1 for 106381535	bna-r.1 for 106381455	bra-r.6 for 103830501	bra-r.6 for 103853160	ath-u.5 for AT1G16690	ath-u.5 for AT1G79020	ghi-r.1 for 107925297	ghi-r.1 for 107930431	cit-r.1 for 102612653	gma-u.5 for 100795526	gma-u.5 for 100811280	vvi-u.5 for 100264813	ppo-u.5 for 18104729	mtr-u.5 for 25501886	sly-u.5 for 101258428	sly-u.5 for 101253542	sot-r.1 for 102600769	sot-r.1 for 102604592	nta-r.1 for 107801921	nta-r.1 for 107774443	nta-r.1 for 107763977	osa-u.5 for 4345317	osa-u.5 for 4346622	zma-u.5 for 103647333	zma-u.5 for 541956	tae-r.2 for 123121049	tae-r.2 for 123103432	tae-r.2 for 123111629	hvu-r.1 for 123452687	sbi-r.1 for 8062061	bdi-r.1 for 100832343	bdi-r.1 for 100832190	cre-r.1 for CHLRE_03g196400v5

Ortholog

Ortholog ID: 5198

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized BNAC06G20180D

uncharacterized LOC106378248

uncharacterized LOC106353423

uncharacterized LOC103830501

uncharacterized LOC103853160

Enhancer of polycomb-like transcription factor protein

uncharacterized LOC107925297

uncharacterized LOC107930431

uncharacterized LOC102612653

enhancer of polycomb homolog 2

uncharacterized LOC100264813

enhancer of polycomb-like protein 1

uncharacterized LOC25501886

uncharacterized LOC101258428

uncharacterized LOC101253542

enhancer of polycomb-like protein 1

uncharacterized LOC102604592

uncharacterized LOC107801921

uncharacterized LOC107774443

uncharacterized LOC107763977

uncharacterized LOC4345317

uncharacterized LOC4346622

uncharacterized LOC103647333

enhancer of polycomb-like protein101

uncharacterized LOC123121049

uncharacterized LOC123103432

uncharacterized LOC123111629

uncharacterized LOC123452687

uncharacterized LOC8062061

enhancer of polycomb homolog 2

uncharacterized LOC100832190

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03015	mRNA surveillance pathway	3
bra03013	Nucleocytoplasmic transport	2
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	4
ath03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00564	Glycerophospholipid metabolism	2
gma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	2
mtr03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	4
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00260	Glycine, serine and threonine metabolism	3
sot00470	D-Amino acid metabolism	3
sot03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03015	mRNA surveillance pathway	2
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	4
nta03022	Basal transcription factors	2
nta03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	4
nta03013	Nucleocytoplasmic transport	2
nta03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	2
zma03013	Nucleocytoplasmic transport	2
zma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	3
zma03015	mRNA surveillance pathway	3
zma03082	ATP-dependent chromatin remodeling	2
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	5
tae03015	mRNA surveillance pathway	4
tae03013	Nucleocytoplasmic transport	3
tae03420	Nucleotide excision repair	2
tae03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	6
tae04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	6
tae03015	mRNA surveillance pathway	4
tae03013	Nucleocytoplasmic transport	3
tae04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2
hvu03083	Polycomb repressive complex	2
hvu03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2

Expression

Expression pattern

Entrez Gene ID^*

106402666

106378248

106353423

103830501

103853160

838238

844243

107925297

107930431

102612653

100795526

100811280

100264813

18104729

25501886

101258428

101253542

102600769

102604592

107801921

107774443

107763977

4345317

4346622

103647333

541956

123121049

123103432

123111629

123452687

8062061

100832343

100832190

5718761

The preparation time of this page was 0.1 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	2	2	1	2	1	1	1	2	2	3	2	2	3	1	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to BNAA07G34590D (bna-r.1 coexpression data)

Top 50 enrichment test to BNAA07G34590D (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**